| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0059 |
|---|
| Symbol | |
|---|
| ID | 5053810 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009379 |
|---|
| Strand | + |
|---|
| Start bp | 64105 |
|---|
| End bp | 64932 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640470211 |
|---|
| Product | ribosomal protein S3 |
|---|
| Protein accession | YP_001154845 |
|---|
| Protein GI | 145588248 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0092] Ribosomal protein S3 |
|---|
| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000000192317 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGACAAA AGATAAACCC AACCGGATTC CGACTCGCGG TAACGAAGAA TTGGACATCA
CGTTGGTATG CAAACAATAC TGACTTCGCA AAGATGCTGA AAGAGGACGT TGATGTCCGC
ATCTATCTGA AGAAGAAGTT GAAGAATGCA TCCGTTAGTA AAGTTGTGAT CGAGCGTCCT
GCTAAGAATG CACGCATCAC TATTTATAGC TCACGTCCAG GTGTTGTGAT CGGTAAAAAA
GGCGAAGATA TTGAAGTGCT CCGTCGCGAA TTACAGAAGC GTATGGGCGT TCCAGTTCAT
GTGAACATTG AAGAAATTCG TAAGCCAGAA GTTGACGCAC AATTGATCGC TGATTCTATT
ACTCAGCAGC TCGAAAAGCG CATCATGTTC CGTCGTGCAA TGAAGCGCGC TATGCAAAAT
GCAATGCGTC TTGGTGCACA AGGTATCAAG ATCATGTCAT CTGGCCGTTT GAATGGCGCT
GAAATTGCTC GCCGCGAATG GTACCGTGAA GGTCGTGTTC CACTCCATAC ATTGAAGGCT
GATATTGATT ACGCGACTTC AGAAGCGGAA ACAACATACG GCATCATCGG TGTAAAAGTT
TGGGTATACA AAGGCGACAC ATTAGGTCGT GGTGCAGAAG CTCAAGCAGC TGCTACATCA
GCAGAGCCAG CCGCTGAAGA AAAGAAAACT CGTCGTGCTC CAAGCAAGAC AGCTGCTCGT
AAACCAGCTG CTGGCACAGA CAAGCCATTA GTTGCTGCTA AACCAGCAGT AAAGCGTGTG
CGTAAGGTTG AAACACCGGC CGCAGATACG CAGAAGTCAG GAGAGTAA
|
|---|
| Protein sequence | MGQKINPTGF RLAVTKNWTS RWYANNTDFA KMLKEDVDVR IYLKKKLKNA SVSKVVIERP
AKNARITIYS SRPGVVIGKK GEDIEVLRRE LQKRMGVPVH VNIEEIRKPE VDAQLIADSI
TQQLEKRIMF RRAMKRAMQN AMRLGAQGIK IMSSGRLNGA EIARREWYRE GRVPLHTLKA
DIDYATSEAE TTYGIIGVKV WVYKGDTLGR GAEAQAAATS AEPAAEEKKT RRAPSKTAAR
KPAAGTDKPL VAAKPAVKRV RKVETPAADT QKSGE
|
|---|
| |