| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0053 |
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| Symbol | rplC |
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| ID | 5052786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 61026 |
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| End bp | 61682 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640470205 |
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| Product | 50S ribosomal protein L3 |
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| Protein accession | YP_001154839 |
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| Protein GI | 145588242 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0087] Ribosomal protein L3 |
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| TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000000506419 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCTTAG GCTTAATCGG CCGCAAGGTC GGCATGACCC GTCTATTTAC GGACGAAGGG
GATTCAATCC CTGTAACCGT AATTGACGTG AGCGATAACA GAATCGCTCA AATCAAGACC
CAGGCAACTG ATGGCTATGA TGCTATCCAG TTGGCACATG GCACACGTAG AGCTACTCGC
GTTACTAAGG CAATGGCTGG TCACTTCGCC AAAGCTGGTG TGATGGCTGG TAACGGTCTC
AACGAATTCC AATTAGACGC AGCAAAAATC GCGGAAATGA CACCAGGACA AGTTATTCCT
GCTGATACTG CATTTACTGC TGGTCAAAAA GTGGACGTAC AAGGCGTGTC TATCGGTAAG
GGCTACGCAG GTACCATCAA GCGTTATCAC TTCGCTTCTG GTCGTGCATC CCACGGTAAC
TCACGTTCAC ATAACGTTCC AGGCTCTATC GGTATGGCGC AAGATCCAGG TCGTGTTTTC
CCTGGTAAGC GTATGACCGG TCACTTGGGT GACGTTACAC GTACAGTTCA AAATTTAGTC
ATCGCACGCA TTGATGCAGA ACGTAATCTC ATCATGGTTA AAGGCGCTAT TCCAGGTGCC
CCAGGCGGTA AAGTTATTGT TACTCCAGCG GTGAAGACAC CGTTGAAGAA GAAATAA
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| Protein sequence | MSLGLIGRKV GMTRLFTDEG DSIPVTVIDV SDNRIAQIKT QATDGYDAIQ LAHGTRRATR
VTKAMAGHFA KAGVMAGNGL NEFQLDAAKI AEMTPGQVIP ADTAFTAGQK VDVQGVSIGK
GYAGTIKRYH FASGRASHGN SRSHNVPGSI GMAQDPGRVF PGKRMTGHLG DVTRTVQNLV
IARIDAERNL IMVKGAIPGA PGGKVIVTPA VKTPLKKK
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