Gene Pnuc_0049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0049 
Symbol 
ID5053316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp56543 
End bp57013 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content48% 
IMG OID640470201 
Product30S ribosomal protein S7 
Protein accessionYP_001154835 
Protein GI145588238 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0049] Ribosomal protein S7 
TIGRFAM ID[TIGR01029] ribosomal protein S7, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.00000000574292 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCACGTC GTCGTGAAGT TCCCAAACGG GAAATTTTGC CGGATCCAAA ATTCGGTAAT 
GTAGAAGTAG CTAAATTCAT GAACGTCCTC ATGTTGGACG GTAAGAAATC GGTTGCAGAG 
CGTATCGTTT ACGGTGCCTT TGATCACATC GAGAAAAAAG CAAACAAAGA ACCACTCGAA 
ATTTTCTCAA CAGCTATGGG CAACGTTAAG CCAATGGTTG AGGTGAAGAG CCGTCGTGTT 
GGTGGTGCAA ACTACCAGGT TCCTGTTGAA GTTCGCCCAT CACGCCGCTC TGCTTTGGCA 
ATGCGCTGGG TGCGCGAAGC CGCTAAAAAG CGCGGTGAAA AATCGATGGC CCAACGTTTG 
GCCAACGAAT TATTAGAAGC TGCAGAAGGT CGCGGCGGAG CAATGAAGAA GCGTGAAGAA 
GTTCACCGTA TGGCAGAAGC TAACAAAGCT TTCTCACATT TCCGCTTCTA A
 
Protein sequence
MPRRREVPKR EILPDPKFGN VEVAKFMNVL MLDGKKSVAE RIVYGAFDHI EKKANKEPLE 
IFSTAMGNVK PMVEVKSRRV GGANYQVPVE VRPSRRSALA MRWVREAAKK RGEKSMAQRL 
ANELLEAAEG RGGAMKKREE VHRMAEANKA FSHFRF