| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0043 |
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| Symbol | rplA |
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| ID | 5053558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 45247 |
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| End bp | 45948 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640470195 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_001154829 |
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| Protein GI | 145588232 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000236116 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTAAGT TATCTAAACG CGTAAAAGCA ATTCAATCTA AAGTTGATCG CAACAAGTTC
TACCCATTAG AAGATGCATT GAACCTCGTC AAAGAGTGTG CAACTGCCAA GTTTGATGAG
TCTATCGACG TTGCTGTTCA GCTGGGTATT GACGCTAAGA AATCTGACCA AGTTGTGCGT
GGCGCAGTAG TGCTCCCAGC TGGTACAGGT AAGCATGTTC GTGTCGCTGT TTTTGCACAA
GGCGAGAAGG CTGAACAAGC TAAAGCTGCA GGCGCAGAAA TCGTTGGCAT GGAAGAACTT
GCTGAACAAA TTAAAGGCGG CAAAATTGAT TTCGATATTT TGATCGCATC CCCAGACACA
ATGAAAATTG TTGGTACTTT AGGTCAAGTA TTGGGCCCAC GCGGCTTGAT GCCAAATCCA
AAAGTGGGAA CAGTTACTCC TGACGTTGCT ACTGCAGTTA AAAATGCAAA AGCTGGTCAA
GTTCAGTTCC GTGTGGACAA AGCGGGTATC GTGCACGCAA GCATTGGCCG CCGTTCATTC
GAGCCAGCTG CATTGAAATC TAACTTGCTC GCATTGCTTG AGGCTTTGAA TAAAGCAAAA
CCTCCTGCAT CTAAGGGTAT TTATTTAAAG AAGGTTGCCG TAAGCAGCAC CATGGGTGCA
GGCGTACGTG TAGACCAAGC ATCGTTACAG GCTGCAGCTT AA
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| Protein sequence | MTKLSKRVKA IQSKVDRNKF YPLEDALNLV KECATAKFDE SIDVAVQLGI DAKKSDQVVR
GAVVLPAGTG KHVRVAVFAQ GEKAEQAKAA GAEIVGMEEL AEQIKGGKID FDILIASPDT
MKIVGTLGQV LGPRGLMPNP KVGTVTPDVA TAVKNAKAGQ VQFRVDKAGI VHASIGRRSF
EPAALKSNLL ALLEALNKAK PPASKGIYLK KVAVSSTMGA GVRVDQASLQ AAA
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