Gene Pnuc_0040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0040 
Symbol 
ID5052000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp43686 
End bp44063 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content45% 
IMG OID640470192 
Productpreprotein translocase, SecE subunit 
Protein accessionYP_001154826 
Protein GI145588229 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0690] Preprotein translocase subunit SecE 
TIGRFAM ID[TIGR00964] preprotein translocase, SecE subunit, bacterial 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.0000000122423 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCATC AAACTGCAAG TCACTCTGAA GAAAAAAGCG GCTGGGTCTC AGGACTCGCC 
GCCTTAATCG TCGTTGCCGC GTTAGTTCTT TACTACACGC TGGTCGACCA ATCTTTATTG 
GTGCGCTTAG CTGTATTGTT TGGCGGGATT GCAGCTGCAG TCATGATTGT GGCGATTTCA 
CCGGATGGGC GCCGTTTTAT CGCCTACGCA AAAGATTCTT GGTATGAAGT AAAAAAGGTT 
GTTTGGCCGA CTCGTAAAGA GACTACCCAG ATGACTCTAG TCGTATTTGG CTTTGTTCTG 
ATCATGTCCC TATTTTTGTG GATTGCAGAC AAATTAATTG AATGGCTAGT TTTTTCAGTC 
TTATTAGGCT GGAAGTGA
 
Protein sequence
MSHQTASHSE EKSGWVSGLA ALIVVAALVL YYTLVDQSLL VRLAVLFGGI AAAVMIVAIS 
PDGRRFIAYA KDSWYEVKKV VWPTRKETTQ MTLVVFGFVL IMSLFLWIAD KLIEWLVFSV 
LLGWK