Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_0036 |
Symbol | |
ID | 5052987 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 34672 |
End bp | 35322 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640470179 |
Product | transport-associated |
Protein accession | YP_001154822 |
Protein GI | 145588225 |
COG category | [R] General function prediction only |
COG ID | [COG2823] Predicted periplasmic or secreted lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0240953 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTATTC AATTTATCAG CAAATTATTC ATTGCAGCAT TACTTGTTTC GCAACTATCA GCATGCGCAG TAGTGGCGAT AGGCGGCGTT ACTGCAAGCG CTGCGATTCT TGCTGACCGT CGTTCTCCAG CTGTTCAGGC AATTGATAAA GGTATTGAGT TACAGGCTGA GAATGCTTTA GCTAAACGCT TTGGCGATAG CGCACACATT AACGTAACAT CCTTCAATCA GAAAGTCCTG TTAACTGGCG AAGTAAAAGA TGCTGATATC AAAGGTGAGG CAGGTGCATA TGTAAAGGCA ATGAAAAATG CGCGTTCAGT ATTTAATGAG CTTGTGATTG GCCCCAACAG CACGTTCTCT TCCCGTGCAA ATGATTCATA TTTAGAGTCA TCAATTAAAA CTCAAATGAT CTTTACAGAT AAGCTGCCTT CAAATTCCAT GGCGATTGTG GCTGAGGGCG GAAGTGTTTA TTTGATGGGC ATCCTTACAC AAAACGAAGC TGATTTAGCG AAGAAGGTTG CCAGTAATAC TAGCGGCGTG AAAGATGTGT ATGCATACTT TGATATTATT TCCGAGCAAG AAAAAGCTCG CTTAGAGAAG CAAGGTAAAG CCGATGAGTC ACAGCCAAAC AGCCCACCAA AATATCAATA A
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Protein sequence | MRIQFISKLF IAALLVSQLS ACAVVAIGGV TASAAILADR RSPAVQAIDK GIELQAENAL AKRFGDSAHI NVTSFNQKVL LTGEVKDADI KGEAGAYVKA MKNARSVFNE LVIGPNSTFS SRANDSYLES SIKTQMIFTD KLPSNSMAIV AEGGSVYLMG ILTQNEADLA KKVASNTSGV KDVYAYFDII SEQEKARLEK QGKADESQPN SPPKYQ
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