Gene Pnuc_0035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0035 
Symbol 
ID5052930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp34010 
End bp34642 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content45% 
IMG OID640470178 
Productphosphoheptose isomerase 
Protein accessionYP_001154821 
Protein GI145588224 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0279] Phosphoheptose isomerase 
TIGRFAM ID[TIGR00441] phosphoheptose isomerase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0672429 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCCCC CTTTGGCGCA TAATATTGCT ATGAATAAAG ACACGATTGA ACGCTTGCGC 
AAGCGCGCAT CTCAACATTT TTTAGACAGC ATTGCGGTAA AGCAAGAAGC AGAAAAGGTG 
TTGCCTGAAT CAGTGGCCCA TGGGGTTCTT GCGATGGTCG ATTGCTTGCG CTCTGGCGGC 
AAGATCATGG CTTGTGGAAA TGGCGGATCT GCAGCAGATG CACAGCACTT TGCAGCAGAG 
TTAATTGGTC GATTCGAAAG AGAACGACAA GAATTAGCAG CGATTGCCTT AACTACGGAT 
ACCTCAATTC TGACTGCTGT AGGAAATGAC TATAGCTATG ATGAAATCTT TAGCAAACAA 
GTGCGTGGTC TTGGAAAAAA AGGCGACATT CTCTTAGGCA TTTCTACATC AGGCAATTCT 
AAGAACGTCG TTAAAGCAAT TGAAGCTGCT AAAACTATGG GCATCAAAAT TATTGCGCTG 
ACTGGTAATG GTGGGGGCAA GATTGCTACG CTGTTAGATC AGGACGATAT CAATCTCTGC 
GCGCCTTCAA CTCGCACTGC CCGCATTCAA GAAACCCATT TAGTTTTACT TCATGGCCTA 
TGTGATGGCG TTGATCACAT CTTGCTCGAC TAA
 
Protein sequence
MKPPLAHNIA MNKDTIERLR KRASQHFLDS IAVKQEAEKV LPESVAHGVL AMVDCLRSGG 
KIMACGNGGS AADAQHFAAE LIGRFERERQ ELAAIALTTD TSILTAVGND YSYDEIFSKQ 
VRGLGKKGDI LLGISTSGNS KNVVKAIEAA KTMGIKIIAL TGNGGGKIAT LLDQDDINLC 
APSTRTARIQ ETHLVLLHGL CDGVDHILLD