Gene Pnuc_0032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0032 
Symbol 
ID5052069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp31085 
End bp32125 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content47% 
IMG OID640470174 
Productfatty acid desaturase 
Protein accessionYP_001154818 
Protein GI145588221 
COG category[I] Lipid transport and metabolism 
COG ID[COG3239] Fatty acid desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.925733 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAATGG CACAAGGCGA AACTGGCCGA GCCATCATGC TTCTGGTGAT CGATTCCCTT 
CTATGGCTAG GTTGTATCGC TGGCACAGTT TTTGTTGAAA GCGTATTGCT CAAGATCGTT 
TTTGGCGTCA TTGCCGGTTT TGTTACCGGG CGAATTTTTA TTTTGGGTCA CGATGCATGT 
CACCAAAGCT TTACGCCAAA CCGCGAACTC AATAAAGTTT TGGGTCGCAT TGCCTTCTTG 
CCATCACTCA CTCCTTATAG CTTGTGGGAT GTGGGTCATA ACGTAGTGCA CCATGGTCAA 
ACCAATTTAA AAGGTTTTGA CTTTGTTTGG GCTCCGCTAT CAAAATCTGA ATACGACGCG 
CTTCCTTCAT GGCGTAAAGC TTTAGAGCGC TTGTATCGAA GTGGTTGGGG ACCGGTTTTC 
TACTACCTCA TTGAAATTTG GTGGAGACGC GAGTACTTTC CAAACGCAAA AAACAAACCT 
GGTGATCGCC CGATTTTCTT AAAAGACAAC TTACTAGTCA CCGCCTTTGC AATTATTTGG 
ATTGGCTGTT TAATTGCAGG CGCCATTGCT ACAGGCCAAT CTATTTGGCT CGGCCTTATC 
ACCGGCTTTG CGGTTCCATT CTTATTTTGG AACGGCATGA TTGGTTTTGT GGTCTACGTA 
CACCATACCC ATCCAAAGGT TTCTTGGTAT GACAAGAAAT CAGAGTGGTT ACGCGCCCAG 
CCATTTGTTT CAACAACGGT TCATCTGACT TTTAACTGGA TTTGGGGCAA ATTGATGCAC 
CACATCATGG AGCATACCGC CCATCACGTC GATATGAGCG TACCGCTATA TCGACTTCCA 
GAGGCACAGC AGACCTTAGA AACCATCCTT CCAGACCGTA TTTTTGTGCA AAAGTTCTCC 
TGGGACTGGT ATTTCGACAC TGCCCGTAAG TGCAAGCTAT ATGACTTTCA GAACAAGGCT 
TGGCTAGACT TTGACGGCAA CAAAACGGCA GATTCCGTCC GAGTTGTGCT CAGCCCAGTA 
CCAGCGGGAC AAAACGGGTA A
 
Protein sequence
MPMAQGETGR AIMLLVIDSL LWLGCIAGTV FVESVLLKIV FGVIAGFVTG RIFILGHDAC 
HQSFTPNREL NKVLGRIAFL PSLTPYSLWD VGHNVVHHGQ TNLKGFDFVW APLSKSEYDA 
LPSWRKALER LYRSGWGPVF YYLIEIWWRR EYFPNAKNKP GDRPIFLKDN LLVTAFAIIW 
IGCLIAGAIA TGQSIWLGLI TGFAVPFLFW NGMIGFVVYV HHTHPKVSWY DKKSEWLRAQ 
PFVSTTVHLT FNWIWGKLMH HIMEHTAHHV DMSVPLYRLP EAQQTLETIL PDRIFVQKFS 
WDWYFDTARK CKLYDFQNKA WLDFDGNKTA DSVRVVLSPV PAGQNG