Gene Pnuc_0022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0022 
Symbol 
ID5052492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp20819 
End bp21289 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content48% 
IMG OID640470164 
ProductATP synthase F0, B subunit 
Protein accessionYP_001154808 
Protein GI145588211 
COG category[C] Energy production and conversion 
COG ID[COG0711] F0F1-type ATP synthase, subunit b 
TIGRFAM ID[TIGR01144] ATP synthase, F0 subunit b 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0311887 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATCTGA ACGCGACCCT ATTCGCGCAA ATGATCGTTT TCTTCGTCTT ATGGTGGGTT 
GTTGCACGCT TCGTGTGGCC ACCGCTGGTT AAGGCGTTAG ACGAGCGTTC AAGCAAAATT
GCTGATGGTT TAGCTGCTGC CGAGCGCGGT AAAGAAGCAC TCGCACTGGC AAGCAATGAA
GCTGAGCAAG AATTAACAAA AGCACGCCAA GAAGGTGTTC AACGCGTTGC TGAAGCTGAA
AAACGTGCAC AAATGTCAGC CGACGAAATT CGTGCTAACG CACAAGCTGA AGCCGCTCGA
ATCATTACTC AAGCTAAGCA AGATGCAGAT CAACAAGTTA CTAGTGCCCG TGAAGTATTG
CGCGCTGAAG TTGCTGTTCT TGCTGTTAAA GGCGCCGAGC AAATTTTGCG TCGTGAAGTA
GATGCAAAAG CACACGGCCA ATTACTTGAT CAACTAAAGG CAGAACTTTG A
 
Protein sequence
MNLNATLFAQ MIVFFVLWWV VARFVWPPLV KALDERSSKI ADGLAAAERG KEALALASNE 
AEQELTKARQ EGVQRVAEAE KRAQMSADEI RANAQAEAAR IITQAKQDAD QQVTSAREVL
RAEVAVLAVK GAEQILRREV DAKAHGQLLD QLKAEL