| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0016 |
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| Symbol | |
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| ID | 5052225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 16598 |
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| End bp | 17266 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640470158 |
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| Product | methyltransferase GidB |
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| Protein accession | YP_001154802 |
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| Protein GI | 145588205 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division |
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| TIGRFAM ID | [TIGR00138] 16S rRNA methyltransferase GidB |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.525658 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCGAAG GATTGCTGGC CTTAGGTATA GAGCAATTAG GACTAGATTT AAGCCCCCAA
AATGTTGCTG ACTTAGAGCT TTTTTTGCAA GAAATGACAC GTTGGAATCA GGTTCATAAT
TTGACTGCAA TCGATAATGA GGAAGGGTCT ATACGGCTAC ATCTCATTGA TTCTATTGCA
GTTTTGCCTG TCATGAGACG TTTTCTTCCA CAGCAAAATC CTAAAATTGC AGACTTAGGT
TCCGGTGGTG GCTTGCCAGC GATACCTATT GCCATTGTTG AGCCAAATTG GCGCCTTACT
CTGATCGAGG CTATTCGTAA GAAGACGGCT TTTTTGCAGC ATGTGCGCGG CAAGCTAAAA
CTTAAAAACA TTGAAGTCAT AAGTGATAGA GTAGAAAATG TTGCATTGCA ACAATCTGGG
CAATTTGATG CAGTCATTTC CCGCGCTTTT ACTAATTTAG CCCGATTCCT TGATCTTTCT
CTTCCCCTGC TAAAGCCTGA TGGGCTTGTA TTTGCCATGA AGGCAAAACG GGCTGATGAG
GAAATGCAAA ATGTATCAAT GCAAGATTGG CATTTATTGG CTGATGAGCC TTTGCACATC
CCTAATCTAG CAGTAGAGCG ACGCCTTTTA GTTCTCACCC CCGTGAGAAA ATTACCACTC
CCCATCTAA
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| Protein sequence | MTEGLLALGI EQLGLDLSPQ NVADLELFLQ EMTRWNQVHN LTAIDNEEGS IRLHLIDSIA
VLPVMRRFLP QQNPKIADLG SGGGLPAIPI AIVEPNWRLT LIEAIRKKTA FLQHVRGKLK
LKNIEVISDR VENVALQQSG QFDAVISRAF TNLARFLDLS LPLLKPDGLV FAMKAKRADE
EMQNVSMQDW HLLADEPLHI PNLAVERRLL VLTPVRKLPL PI
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