Gene Pnuc_0015 details

Gene Information

• Locus tag: Pnuc_0015
• ID: 5052185
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1
• Kingdom: Bacteria
• Replicon accession: NC_009379
• Strand: +
• Start bp: 14682
• End bp: 16601
• Gene Length: 1920 bp
• Protein Length: 639 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 640470157
• Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
• Protein accession: YP_001154801
• Protein GI: 145588204
• COG category: [D] Cell cycle control, cell division, chromosome partitioning
• COG ID: [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division
• TIGRFAM ID: [TIGR00136] glucose-inhibited division protein A

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.408302
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTTATT CCAAAAATTT CGATGTCATC GTAGTGGGCG GCGGTCACGC TGGGACTGAA 
GCTGCTCTAG CATCAGCACG CATGGGCTGC GACACCCTAC TGATTACCCA TAGCATTGAG 
AATTTAGGCG CAATGAGCTG CAACCCATCA ATTGGTGGAA TTGGCAAAGG ACACCTAGTT 
AAAGAAATTG ATGCTATGGG CGGCGCCATG GCGGCGGCTA CCGATGAGGC AGGAATTCAA 
TTTCGCATTC TCAATTCGAG CAAGGGTCCT GCAGTGAGAG CTACTCGCGC CCAAGGCGAT 
CGAGTTTTAT ATAAGGCCGC AATACGCCGT CGCTTGGAAA ATCAGCCCAA TTTATCCTTG 
TTTCAGGCTG CAGTCGATGA TCTTTTGGTT AAAGGTGATG AAGTCCAGGG CGTTGTTACT 
CAAATGGGTC TGGAGTTTAT GGCCAAAAAG GTAGTTTTAA CAGCCGGCAC CTTTTTAGAT 
GGCAAGATTC ACGTTGGACT AAATAATTAT GCTGGCGGAC GCGCGGGTGA TCCTGCCGCC 
GTTTCTCTCT CTGCCCGATT AAAGGAATTA AAACTTCCTC AGGGGAGATT AAAAACCGGC 
ACTCCACCCC GTATTGATGG CAGAACAATT GATTTTTCAG TCATGCTGGA GCAGCCGGGC 
GATTTAGATC CCGTCCCAGT CTTCTCTTAT TTGGGCCGTC CCGAGCAGCA TCCTAAACAG 
GTTCCTTGCT GGATTTCCCA TACTAATGAG CAAACCCACG ACATTATTCG TGGAGGCTTA 
GACCGCTCTC CAATGTATAC CGGTGTGATT GAAGGGGTTG GCCCACGCTA TTGCCCTTCT 
ATTGAGGACA AAATCCATCG TTTTGCCTCG AGAAATAGTC ACCAAATCTT TTTAGAGCCT 
GAGGGCCTAA CCACAAATGA GTTCTATCCC AATGGAATTT CAACTAGCCT GCCTTTTGAT 
GTTCAGTGGG AATTGGTACG CAGCATCCGC GGTCTAGAAT CTGCGGTAAT TGTGCGCCCT 
GGCTATGCTA TTGAGTACGA TTTCTTTGAT CCGCGCCACT TGCGCCATAG TTTAGAGACT 
AAGGCCATTG GCGGATTGTA TTTTGCGGGT CAGATTAATG GCACAACGGG TTATGAAGAG 
GCTGCCGCCC AAGGGATGTT AGCCGGTATT AATGCGGGCC TAGCAGCCCA AGGCAAAGAG 
GCTTGGTTGC CAAAGCGTAG TGAGTCTTAT ATTGGCGTCT TGGTGGATGA TCTGATTACC 
CGCGGCGTTC AGGAACCCTA CCGAATGTTT ACTAGTCGAG CTGAATACCG TTTAAGTCTT 
CGCGAAGACA ATGCGGACAT GCGTTTAACC GCCATTGGTA GAGATTTGGG CTTGGTTGAC 
GACTATCGTT GGGAGGTCTT TTGCAGAAAA CAGGAAGCTG TTTCACGTGA AACATCTCGC 
CTGAAGGATA TTTGGGTTGG ACCAAAACAT GAGATCGCCC CCCTAGTGAC GCAACTTTTG 
GGACAAGAGC TATCGCATGA GTGCAACTTA ACCGAGCTTT TGCGCCGCCC CGGCATTACT 
TATGAAGCAA TCACCGCTCT CGGCAATCGG ATTTGGGCAC CGGAATCATT GGATGATGAT 
CTTGGTTTGG CTGCACAAAT TAGCGACCAG GTGGAGATTT CGGTTAAATA TCAGGGTTAT 
ATAGAGCGTC AGGCAGTAGA AATTGCGCGA CAAGAGCACA ACGAAACTTT TCCCCTTCCG 
GAGGGTTTGG ATTATTCGCA GGTTCTAGGC CTTTCTAAGG AGGTTCAACA AAAGCTGAAT 
CTCCATAAGC CCGAAACTTT GGGCCAAGCA GGACGAATTT CGGGGGTTAC TCCAGCAGCG 
CTATCTTTAC TGTTGGTGCA TCTTAAAAAA GGCTTGGGCC GCACTCAAGA GACGATATGA 

 

Protein sequence

MRYSKNFDVI VVGGGHAGTE AALASARMGC DTLLITHSIE NLGAMSCNPS IGGIGKGHLV 
KEIDAMGGAM AAATDEAGIQ FRILNSSKGP AVRATRAQGD RVLYKAAIRR RLENQPNLSL 
FQAAVDDLLV KGDEVQGVVT QMGLEFMAKK VVLTAGTFLD GKIHVGLNNY AGGRAGDPAA 
VSLSARLKEL KLPQGRLKTG TPPRIDGRTI DFSVMLEQPG DLDPVPVFSY LGRPEQHPKQ 
VPCWISHTNE QTHDIIRGGL DRSPMYTGVI EGVGPRYCPS IEDKIHRFAS RNSHQIFLEP 
EGLTTNEFYP NGISTSLPFD VQWELVRSIR GLESAVIVRP GYAIEYDFFD PRHLRHSLET 
KAIGGLYFAG QINGTTGYEE AAAQGMLAGI NAGLAAQGKE AWLPKRSESY IGVLVDDLIT 
RGVQEPYRMF TSRAEYRLSL REDNADMRLT AIGRDLGLVD DYRWEVFCRK QEAVSRETSR 
LKDIWVGPKH EIAPLVTQLL GQELSHECNL TELLRRPGIT YEAITALGNR IWAPESLDDD 
LGLAAQISDQ VEISVKYQGY IERQAVEIAR QEHNETFPLP EGLDYSQVLG LSKEVQQKLN 
LHKPETLGQA GRISGVTPAA LSLLLVHLKK GLGRTQETI