Gene Pnuc_0014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0014 
Symbol 
ID5052388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp13784 
End bp14575 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content46% 
IMG OID640470156 
Producthypothetical protein 
Protein accessionYP_001154800 
Protein GI145588203 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATTGGGC CTCCCATCGA ATTTTCCATT TACATCTGGC CACTGCTTTT TTGCGCAGCA 
TTTTTTGCTG GCCTAGTTGA TGCTGTTGCA GGCGGAGGTG GTCTCATCCA AGTCCCCGCC 
CTTTTTGCAG CCTATCCCGA CGTTCCTCCG GCAACTTTGC TTTCTACCAA CAAGCTTGCC 
TCTGTTGGGG GAACCCTGAA TGCTGCTCGT AAATTTCTTC GACACGTTTC TTTGCCTTGG 
GCGGTGGTTG GTCCTGCGAT CGTGGCTGCT TTTGTAGGCT CCCTTATGGG GGCGAACGCT 
GTAAGTCATT TTCCTGCCGA GCCTTTGCGT AAAGCGCTTC CCTTCGTTTT AGTATTTTTA 
TTAATCTATA CCTGGTTTCA GCCTTCCCTA GGCGAGGCCC ATGCGCCAAA AGAAGTAAGC 
CACTATCAAA AATTTAAAGC TTTACTTCTT GGCCTCACTA TTGGTTTTTA TGATGGATTC 
TTTGGTCCTG GCACAGGAAG TTTTCTATTG TTTGGATTTG TGCGTTTCTT TGGATTTGAT 
TTTTTGCATG CATCTGCAGC AACTAAGCTC GTTAACGTTT CCACCAATCT TGCAGCAATA 
CTGATGTTGG CTAGCTTGGG CCAAATTAAT TGGCCGCTTG GGTTTGTCAT GATGATCGCC 
AATATTGCAG GCAGTCAGTT TGGCAGCCGT CTTGCAATTA AGCATGGGAG TGGATTTGTT 
AGGAAGGTAT TCCTAGTAAT TGTGAGCGCC CTTATTCTGA AGTCTGCTTG GAACGCATAT 
TTCTTGAATT AA
 
Protein sequence
MIGPPIEFSI YIWPLLFCAA FFAGLVDAVA GGGGLIQVPA LFAAYPDVPP ATLLSTNKLA 
SVGGTLNAAR KFLRHVSLPW AVVGPAIVAA FVGSLMGANA VSHFPAEPLR KALPFVLVFL 
LIYTWFQPSL GEAHAPKEVS HYQKFKALLL GLTIGFYDGF FGPGTGSFLL FGFVRFFGFD 
FLHASAATKL VNVSTNLAAI LMLASLGQIN WPLGFVMMIA NIAGSQFGSR LAIKHGSGFV 
RKVFLVIVSA LILKSAWNAY FLN