| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0009 |
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| Symbol | |
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| ID | 5053022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 8878 |
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| End bp | 9762 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640470151 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001154795 |
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| Protein GI | 145588198 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.30949 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGAAATTT TCGGCCTCTC TAGTTCCGCT CTGTTAAGCC AGCTCCTTTT GGGGCTGGTT
AACGGCAGCT TTTATGCAAT CCTAAGCTTG GGGTTGGCTG TTATCTTTGG CCTTCTCAAT
GTGATTAACT TTTCACACGG CGCCATGTTT ATGTTGGGCG CTATTGTGAC TTGGATGGCA
GGGCAGTATT TCGGAATTAA CTACTGGGTG ATGCTTTTGT TGTCCCCGTT GATTGTTGGT
CTGGTGGGAA TTGTGATTGA GCGACTTTTA CTTCGTCACC TATATCAACT AGATCATCTT
TATGGCTTAT TGTTAACCTT TGGCCTTACC TTATTTATTG AGGGCGTTTT GCGCTCAATC
TACGGAGCCT CTGGGCTTGC TTATAACACC CCCGAAGCAC TTGGTGGGGC TACCGATTTG
GGTTTTATGG TGTTGCCAAA TTATCGTGCC TGGGTGGTGT TTGCTTCATT AACGGTCTGC
TTTGCTACTT GGTACATCAT AGAAAAGACC AGCATCGGCG CATATTTGCG CGCTGGGACT
GAAAATCCAA AGCTTGTACA AGCTTTTGGG GTGAACTTCC CACTAATGAC AACCTTAACC
TATGGGTTTG GTGTTGCGCT TGCTGCATTC TCTGGCGTTC TTGCGGCGCC TATTATTCAA
ATTTCTCCTT TGATGGGCTC TAACCTCATC ATTATTGTTT TTGCTGTTGT AGTGATTGGC
GGAATGGGCT CGATCATGGG CTCAATTCTG ACTGGCTTAG GTTTGGGTTT GATTGAGGGC
CTCACCAAGG TTTTTTATCC GCAAGCCTCT AGTACCGTAG TGTTTGCCAT CATGGTGATT
GTCTTGTTGT TTAGACCGGC AGGATTGTTT GGGCGCGAAA AATGA
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| Protein sequence | MEIFGLSSSA LLSQLLLGLV NGSFYAILSL GLAVIFGLLN VINFSHGAMF MLGAIVTWMA
GQYFGINYWV MLLLSPLIVG LVGIVIERLL LRHLYQLDHL YGLLLTFGLT LFIEGVLRSI
YGASGLAYNT PEALGGATDL GFMVLPNYRA WVVFASLTVC FATWYIIEKT SIGAYLRAGT
ENPKLVQAFG VNFPLMTTLT YGFGVALAAF SGVLAAPIIQ ISPLMGSNLI IIVFAVVVIG
GMGSIMGSIL TGLGLGLIEG LTKVFYPQAS STVVFAIMVI VLLFRPAGLF GREK
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