| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0007 |
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| Symbol | |
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| ID | 5053676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 6939 |
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| End bp | 7643 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640470149 |
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| Product | ABC transporter related |
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| Protein accession | YP_001154793 |
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| Protein GI | 145588196 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.315079 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAATG TGGCGTTAGA GGTTAAAAAC TTAGAGTCTT GGTATGGGGA GTCCCATATT
TTGCATGGTG TGAATTTTTC TGTACGAGAT GGAGAGGTTG TGACTCTTCT GGGAAGAAAT
GGCGCAGGCA GAAGCACTAT TTTGAAGACC ATACTAGGCC TTACGAGCAA ACGAAAAGGC
TCTATTGAGG TCTTCGGCAA GGAGACCATT GCTTTGCCCA CGTACCAAAT CGCTCGTCTT
GGTATTGGCT ATTGCCCAGA AGAGCGCGGT ATTTTCGCCA GTCTGGACAC AGAAGAAAAC
CTATTACTTC CGCCCAAAGT ATCTTCGGGC GGTATGGATG TAGAAGAAAT TTATGAAATG
TTCCCCAATC TTTATGAAAG ACGGAATAGC CCTGGCACCC GACTTTCTGG CGGTGAACAG
CAAATGTTGG CGATGGCTAG AATTTTGAGA ACGGGCGCAA AGCTTTTGCT GTTGGACGAG
ATTACCGAAG GTCTTGCGCC GGTGATTGTG CAAAAACTGG GTGAGGTGGT AACCAAACTC
AGAAATAAGG GTTTTACGAT TGTTCTTGTA GAGCAAAACT TTAGATTTGC AGCGGGCCTC
GCTGATAGGC ATTATGTTGT AGAGGGTGGC CAGATTGTTG AGGTAGTTCA ACACTCTGAG
CTAGAGGCCA AAGCTGAGTT ATTAAATGGT TATTTAGGGG TTTAA
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| Protein sequence | MSNVALEVKN LESWYGESHI LHGVNFSVRD GEVVTLLGRN GAGRSTILKT ILGLTSKRKG
SIEVFGKETI ALPTYQIARL GIGYCPEERG IFASLDTEEN LLLPPKVSSG GMDVEEIYEM
FPNLYERRNS PGTRLSGGEQ QMLAMARILR TGAKLLLLDE ITEGLAPVIV QKLGEVVTKL
RNKGFTIVLV EQNFRFAAGL ADRHYVVEGG QIVEVVQHSE LEAKAELLNG YLGV
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