| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0003 |
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| Symbol | |
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| ID | 5052081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 2851 |
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| End bp | 5349 |
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| Gene Length | 2499 bp |
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| Protein Length | 832 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640470145 |
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| Product | DNA gyrase, B subunit |
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| Protein accession | YP_001154789 |
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| Protein GI | 145588192 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGAAG AAAAAAAAGT AGTAGAGCAG TACGGTGCTG CATCGATTCA AATCTTAGAA
GGTCTTGAGG CTGTTCGTAA ACGCCCAGGG ATGTACATCG GAGATACATC TGATGGCACA
GGCCTTCATC ATTTGGTTTT TGAGGTCTTG GATAATTCGA TTGATGAAGC ATTAGCAGGC
TATTGCTCGG AAATCACGGT TGTTATTCAA ACTGATAATT CAATTTCAAT TGTTGATAAC
GGGCGCGGCG TTCCAACGGG TATTAAATAC GACGATAAAC ACGAACCCAA AAGAAGTGCT
GCTGAAATCG TAATGACTGA GTTGCATGCT GGTGGTAAGT TCGACCAAAA CAGCTATAAA
GTTTCTGGCG GTCTTCATGG TGTGGGTGTT AGTTGTGTAA ATGCACTATC TAAGTGGTTA
AAACTTACCA TTCGTCGTGA TGGTAAGGCG CACTATATGG AGTTTGCGCG CGGCGTTATC
CAAAACCGTA ATGTTGTAGA TGAAGATGGG GTAATGGTGT CCCCAATCAC GGTTACTGGT
GATACCGAGC TCTCGGGTAC GGAAGTTCAT TTCTTGGCGG ATGAAACTAT TTTTGGAAAT
GTAGAGTTCC ATTATGAAAT TCTAGTTAAA CGTATTCGTG AACTCTCATT CTTAAATAAT
GGTGTGCACA TTAAGTTGAT TGATCAGCGC ACAGGGCAAG AAGAAGATTT TGCATTCTCT
GGCGGTGTTA AAGGTTTTGT TGAATATATC AATCAAACTA AGAATGTTTT ACACCCGAAT
ATTTTTTATG CTGAGGGTGT TCGCCCTTCA GATTTAGGTG GACAAATTAC TGCCGAAGTA
TCTATGCAGT GGAATGATAG TTTTAGTGAG CAAGTACTTT GTTTTACAAA TAACATTCCA
CAGCGCGATG GTGGAACCCA TTTAACTGGC CTGCGTGCTG CAATGACTCG TGTCATCAAT
AAATACATTG ATGAAAATGA AGTTGCTAAA AAGGCCAAAG TAGAAATTTC CGGTGACGAT
ATGCGTGAAG GCTTAGCCTG CGTGTTATCG GTGAAAGTTC CAGAGCCTAA ATTCTCAAGC
CAAACAAAAG ATAAATTAGT TTCAAGTGAG GTGCGCGGCC CTGTAGAAGA GATTGTTGCG
GAAGCACTCA GTGCATACCT ACAAGAGCGT CCAGCCGACG CGAAGATTCT GTGCGGCAAG
ATAGTTGATG CAGCACGTGC TCGTGAGGCA GCGCGCAAAG CGCGTGACAT GACCAGGCGT
AAAGGTGTAT TGGATGGGCT TGGTTTGCCT GGTAAGCTGG CCGACTGTCA AGAAAAGGAT
CCAACCAAAT CTGAATTGTT TATTGTCGAG GGTGATTCTG CAGGCGGCTC AGCCAAACAA
GGCCGCGATC GTCGCTTTCA AGCAATTCTT CCTTTAAAAG GAAAAATCCT TAACGTAGAA
AAAGCGCGTT TCGACAAAAT GCTAGCAAGC CAAGAGGTGG TTACCTTAAT CACTGTCTTG
GGTACTGGTA TTGGAATTGA AGAATATAAA GCCGACAAAC TTCGCTATCA CCGAATCATC
ATCATGACCG ACGCGGACGT TGACGGAAGC CATATTCGTA CGCTGTTGCT GACATTCTTT
TATAGACAAA TGCCGGAGTT GATTGAGCGT GGCCATATTT ATATTGCTCA ACCACCACTC
TACAAAGTTA AGTTTGGAAA AAATGAGCAA TACATAAAAG ATGACAACGA ATTAAATCAG
TTGTTATTGA AAATTGCGCT CGAGACCGCT TCTTTACAAA CGCCTACTGG TGAAGTCATT
GAGGGTGAGT CGCTAAACGA GTTGGCTAAG CACTACCAAG TTATCCAATC TATTGTTGAC
CGTTTATCCC GCACGATCGA TGAGGATGCT TTACGAGCAA TTGCATCGGG TACACAGTTA
AATTTAGATA CAGAAAAATC TGCAAATGAA TCAGCCGATC GCTTAAGACA GGCACTCGCT
GATTCATTAA ACCCATTGGC GCTCCCCCCG GAGATCATTG TTCAGAAAGA GGACCGCACA
GAACGATTTA GATTGTTGCT GTCCCGCCGC ATTCACGGCA ATCTGAAGCT TTCAACCATT
AACTCAGATT TTGTTCATGG CGATGATTAT CAAAGCCTTG CTAATGCCGC AGCTGTTTTA
TCTGGCAAAG TATTGCCCGG CACCAAAGTG CGTCGTGGCG ATCCAGACAA GAATCAGAAA
GAGCAAACAA TTAATGACTT TAGGGCTGCC TTCTCATGGT TATTGTCAGA GGCTGAGCGC
GTATTGAGTC GTCAACGCTA TAAGGGTCTG GGCGAGATGA ACCCTTCTCA GTTGTGGGAG
ACCACAATGG ATGCAAGCTC TCGGACCTTG CTGCAAGTGA AGATAGAGGA TGCAATTGCT
GCAGACCAAG TATTTACAAC ATTAATGGGT GATGAGGTTG AGCCTCGTCG CGCGTTCATT
GAAAAGAACG CATTGATTGC TCGGAACCTA GACGTTTAA
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| Protein sequence | MTEEKKVVEQ YGAASIQILE GLEAVRKRPG MYIGDTSDGT GLHHLVFEVL DNSIDEALAG
YCSEITVVIQ TDNSISIVDN GRGVPTGIKY DDKHEPKRSA AEIVMTELHA GGKFDQNSYK
VSGGLHGVGV SCVNALSKWL KLTIRRDGKA HYMEFARGVI QNRNVVDEDG VMVSPITVTG
DTELSGTEVH FLADETIFGN VEFHYEILVK RIRELSFLNN GVHIKLIDQR TGQEEDFAFS
GGVKGFVEYI NQTKNVLHPN IFYAEGVRPS DLGGQITAEV SMQWNDSFSE QVLCFTNNIP
QRDGGTHLTG LRAAMTRVIN KYIDENEVAK KAKVEISGDD MREGLACVLS VKVPEPKFSS
QTKDKLVSSE VRGPVEEIVA EALSAYLQER PADAKILCGK IVDAARAREA ARKARDMTRR
KGVLDGLGLP GKLADCQEKD PTKSELFIVE GDSAGGSAKQ GRDRRFQAIL PLKGKILNVE
KARFDKMLAS QEVVTLITVL GTGIGIEEYK ADKLRYHRII IMTDADVDGS HIRTLLLTFF
YRQMPELIER GHIYIAQPPL YKVKFGKNEQ YIKDDNELNQ LLLKIALETA SLQTPTGEVI
EGESLNELAK HYQVIQSIVD RLSRTIDEDA LRAIASGTQL NLDTEKSANE SADRLRQALA
DSLNPLALPP EIIVQKEDRT ERFRLLLSRR IHGNLKLSTI NSDFVHGDDY QSLANAAAVL
SGKVLPGTKV RRGDPDKNQK EQTINDFRAA FSWLLSEAER VLSRQRYKGL GEMNPSQLWE
TTMDASSRTL LQVKIEDAIA ADQVFTTLMG DEVEPRRAFI EKNALIARNL DV
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