| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0001 |
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| Symbol | |
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| ID | 5053967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 33 |
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| End bp | 1460 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640470143 |
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| Product | chromosomal replication initiator protein DnaA |
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| Protein accession | YP_001154787 |
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| Protein GI | 145588190 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0593] ATPase involved in DNA replication initiation |
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| TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.202829 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAACT TACAAAATCC CCCCGCCTTG AATTCAATAA GCCCCTTGGG TTTTTGGGAT
GGTGCCATTA GTGCACTTTC CCGCGAGCTG TCGCCCCAGC AATTTAAAAC ATGGATACAG
CCCCTAACAC TTGTGTCTTT CGATGAGAGT GACTGCTCAC TAACTGTTGG CGCCCCCAAT
CGATTTAAGT TAGACTGGAT TAAGAAAACT TTTGCGGATC GCTTTCAAGA GCTTGCATCT
GAGTATTTTT CTGGCCCAAT TAATATTAAT TTTGTTCTTG CTGTGGAGGG TAGTGCTCCC
ACCCCAAGCA ATGTACCGGC GCCTGAAATT GACATGTCAG AGCCACAATC CCAGGACGAG
TCTTCACCCA TTATTTCGGT TGAAGAGCAA TCATTTGAGA TTGAAGACCA CTCAAAACTG
AACCCAAACC TCACTTTTGA GACATTTGTA ACCGGAAAAG CAAACCAATT AGCTAGGGCA
GCCTCTATTC AAGTGGCACA TAACCCAGGA ACATCCTACA ACCCAATGTT TTTATATGGG
GGGGTTGGGC TGGGCAAAAC CCACCTTATT CACGCCATCG GCAACCACTT ATTAAAAGAG
AAGCCAAACG CCAGAATTCG CTATATACAC GCCGAACAAT ACGTTTCGGA CGTCGTTAGA
GCCTACCAAC AAAAAGCTTT TGATCGTTTT AAGCGCTACT ACCACTCGCT CGACCTACTA
TTAATTGATG ACATCCAATT TTTTAGCGGC AAGTCTAGAA CCCAGGAAGA GTTTTTTTAC
GCCTTTGAGG CCCTATTAAG CAATAAGTCT CAAGTCATTA TTACTAGTGA TACCTACCCA
AAGGAAATGG CTGGGATTGA TGACCGCCTC ATTTCACGGT TTGATTCCGG CCTCACAGTG
GCCATAGAAC CCCCTGAATT AGAGATGCGA GTGGCTATTT TGATGAAAAA AGCGGCTAGC
GAGGGCATCC CCATGACAGA AGATGTCGCA TTTTTTGTGG CTAAACATCT GCGCTCCAAC
GTTCGTGAGT TAGAGGGTGC GCTTCGTAAG ATACTGGCCT TTGTACGCTT CCACGGGCGT
GAGGTCACCA TTGATGTAGC CCGAATAGCC TTAAAAGACC TTCTTTCCAT CCAAAATAGG
CAGATTTCAG TAGAAAACAT CCAAAAAGCG GTTGCAGATT TTTATAGCAT CAAGGTCGCT
GACATGTATT CGAAGAAGCG GCCCGCCAAC ATTGCACGTC CTCGTCAAAT TGCTATGTTT
ATGGCTAAAG AGTTAACTCA AAAGAGTCTG CCAGAGATTG GTGAATTGTT TGGCGGAAGA
GACCACACAA CTGTTTTACA TGCTGTTCGT AAAATTGGTG AGGAACGTTC TCACGATAGC
CAGTTAAATC ATGAAATCCA TGTAATAGAG CAAACCTTAA AAGCTTAA
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| Protein sequence | MSNLQNPPAL NSISPLGFWD GAISALSREL SPQQFKTWIQ PLTLVSFDES DCSLTVGAPN
RFKLDWIKKT FADRFQELAS EYFSGPININ FVLAVEGSAP TPSNVPAPEI DMSEPQSQDE
SSPIISVEEQ SFEIEDHSKL NPNLTFETFV TGKANQLARA ASIQVAHNPG TSYNPMFLYG
GVGLGKTHLI HAIGNHLLKE KPNARIRYIH AEQYVSDVVR AYQQKAFDRF KRYYHSLDLL
LIDDIQFFSG KSRTQEEFFY AFEALLSNKS QVIITSDTYP KEMAGIDDRL ISRFDSGLTV
AIEPPELEMR VAILMKKAAS EGIPMTEDVA FFVAKHLRSN VRELEGALRK ILAFVRFHGR
EVTIDVARIA LKDLLSIQNR QISVENIQKA VADFYSIKVA DMYSKKRPAN IARPRQIAMF
MAKELTQKSL PEIGELFGGR DHTTVLHAVR KIGEERSHDS QLNHEIHVIE QTLKA
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