Gene Pars_2366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_2366 
Symbol 
ID5055457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp2115295 
End bp2116071 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content51% 
IMG OID640469917 
Productputative circadian clock protein, KaiC 
Protein accessionYP_001154561 
Protein GI145592559 
COG category[T] Signal transduction mechanisms 
COG ID[COG0467] RecA-superfamily ATPases implicated in signal transduction 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.160155 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGAAT ATCACCTATA CTACGAGACT ATCCCCACGG GGATCGAGGG GCTAGACAGC 
GTGTTGGGAG GCGGTTTCAT AAGGGGCAGG ACGTACCTAA TCTCTGGGGA GACTGGAACC
GCCAAGACGT TGACTGCTCT CACTTTTCTT ATTCAGGGCG CGCTCAAGTA CGGGGAGCCC
GGTATATACA TATCCGTTGA TGAGACGTAT GAGCAGTTTG TGGAGGGCGC CAGACGCTTT
GGCTGGGATA TAGAAGATCT AAGAGCAAGA GGGCTGATAG AGGTTCTGGT GCCCGAGATG
GATATAGTTG AGCGGATCCG CGAAAAGGAC CCGACAGCAA TTGCGAAGTC TCTTGTGGCA
TCCATAAGGG AGTACGTGGC GGCTCTAAAC GCGCAGAGGC TCGTGATAGA TCCCATCGCG
CCGCTTGTCT CACTGGACAA GGATGTCCAA GTTTTAAGGG AGTACATCAG GGTTCTGGTT
ATGAGTATCG AGAGAGAGAT AGGGACTACT AACATAATCA CAACTGAAAT CCCATCGGGC
TCTGGTGCCA TCAGCAGATA CGGCGTTGAG GAGTTCTTAG CCACAGGCGT TTTTATAATG
GGAATCGGCA AGACCGCAGA TGGGCAGTTC AAACGAGTGA TGTTCATAAG GAAAATGCGC
TGGAGCGCAG TACATCCGGG CGTGTATGAG GTAGAAATTG TGCCAAAGGT AGGCATCATC
GTGAAGGGAC AAATAAGAGA ACGCCTTGTC CCAGTCACCT ACTTGCCAAC TCTGTAG
 
Protein sequence
MAEYHLYYET IPTGIEGLDS VLGGGFIRGR TYLISGETGT AKTLTALTFL IQGALKYGEP 
GIYISVDETY EQFVEGARRF GWDIEDLRAR GLIEVLVPEM DIVERIREKD PTAIAKSLVA
SIREYVAALN AQRLVIDPIA PLVSLDKDVQ VLREYIRVLV MSIEREIGTT NIITTEIPSG
SGAISRYGVE EFLATGVFIM GIGKTADGQF KRVMFIRKMR WSAVHPGVYE VEIVPKVGII
VKGQIRERLV PVTYLPTL