Gene Pars_2354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_2354 
Symbol 
ID5055820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp2104480 
End bp2104830 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content57% 
IMG OID640469905 
Productpeptidyl-tRNA hydrolase 
Protein accessionYP_001154549 
Protein GI145592547 
COG category[S] Function unknown 
COG ID[COG1990] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00283] peptidyl-tRNA hydrolase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.848355 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATTG CTGTTAGGAA GGATTTAGAG ATTTCTTGCG GGAAAGCGGC GGCGCAGGTA 
GGGCACGCAG CTGTGGAGTG TGTATTACTA GCGATGCGGG ATGTGAGGTG GAGGAAGTGG
CTAGATAAGT GGCTTACCGA GGGGCAGAAA AAGGTGGTGC TGGCGGCGGA GGACGCCGCC
CACTTGTACC AGATTTACGA AACTGCGAAG AGGCTCGACT TGCCCACAGC GGTGGTGGTG
GACGCGGGGC TTACAGAACT CCCGCCAAAC ACGCCAACTG CCGTCTGCGT GGGGCCAGGC
CCTGACGACG TTGTGGACAA GGTTACTGGG TCTCTTAGGT TGTATCGATA A
 
Protein sequence
MTIAVRKDLE ISCGKAAAQV GHAAVECVLL AMRDVRWRKW LDKWLTEGQK KVVLAAEDAA 
HLYQIYETAK RLDLPTAVVV DAGLTELPPN TPTAVCVGPG PDDVVDKVTG SLRLYR