| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_2346 |
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| Symbol | |
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| ID | 5056331 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum arsenaticum DSM 13514 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009376 |
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| Strand | + |
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| Start bp | 2096549 |
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| End bp | 2098744 |
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| Gene Length | 2196 bp |
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| Protein Length | 731 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640469897 |
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| Product | AAA family ATPase, CDC48 subfamily protein |
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| Protein accession | YP_001154541 |
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| Protein GI | 145592539 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0464] ATPases of the AAA+ class |
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| TIGRFAM ID | [TIGR01242] 26S proteasome subunit P45 family
[TIGR01243] AAA family ATPase, CDC48 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.654531 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00924894 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTCTGAAT GGATTGAGCT TAGGGTTCTT GAGAGTAAGG CTCGGGATGC CAATAGGCCC
GTGGTTAGGA TTGATCCTGA AGTGATGGAG AGAACGGGGA TTGCTGTTGG CGATGTGATC
GAAATAGTGG GGAGGAGGAG GACGGCCGCC AAGGTGTGGA ACGGCTTGCC TGAGGATAGG
GGGAAGGGCG TCATAAGGAT GAACAGCATA TTGAGGAAAA ACGCCGATGT TTCACTTAAT
GAGACTGTTA AGGTTAGGCG GGTCGAGCCG AAGCCGGCGG CTTTTGTAAA GCTGGCGCCT
GTATCTATGA CAATCGCAGT TGATGCTAAC TTTCTACAAT ATATCAAGCA GAGGCTGAGG
GAGTACGTGG TTGTGGAGGG CGACATGTTG CAGATATACG TGCTGAGCCA GCCCCTTACG
TTCCAAGTAG TGCAGACAAA GCCTTCCAAC GCTATTCTTA TAATTACCGA AGACACGCAG
ATCCAGATAT TTGAAAAGCC TGTCTCCGGC GTCAAGATAC CTCATGTCAC TTGGGAGGAT
ATTGGTGATT TGGAGGATGC TAAGCAGAAG ATTCGGGAGC TTGTGGAGCT TCCTCTTCGT
CACCCGGAGC TTTTTAAGCA TTTGGGTATT GAGCCGCCTA AGGGTATTCT GTTAATTGGC
CCTCCCGGTA CTGGGAAGAC GCTTTTGGCA AAAGCCGTTG CCAACGAGGC CAACGCCTAC
TTCGTAGCCA TAAATGGGCC GGAGATTATG TCTAAGTACT ACGGCGAGAG TGAGGCTAGG
CTGAGGGAGA TATTCGAAGA GGCTAAGAAA AACGCCCCGG CGATAATCTT CATCGACGAA
ATAGACGCCA TAGCCCCCAA GAGGGAGGAG GTGACGGGCG AAGTGGAGAA GAGAGTAGTA
GCCCAGCTGT TGACATTAAT GGACGGACTA CAAGAAAGAG GCCAAGTAGT AGTCATAGGA
GCCACCAACA GACCAGACGC AGTAGACCCA GCACTAAGAA GACCAGGAAG ATTCGACAGA
GAGATTTGGA TTAATCCGCC AGATTTCAAG GGGAGGTACG AAATTCTGCA AATTCATACC
CGCAACATGC CGCTGGCGCC GGATGTTGAC TTAAGGAAGT TGGCTGAGAT CACACATGGC
TTCTCTGGAG CAGATCTCGC CGCGTTGGCG AGAGAGGCTG CGATGTCGGC GTTGAGGAGG
GCAATTCAGA GTGGGCTTAT TGATCTGAAC CAGCCGTCGA TACCGCCTGA GGTGTTTGAA
CAGATTAAGG TCACCATGGC GGATTTCACC AGCGCGCTGA GGGAGATTGT GCCCTCTGCG
CTGAGGGAGA TACATATCGA GGTGCCGAGA GTGAGGTGGG AGGATGTTGG CGGCTTGGAG
AACGTGAAGC AAGAGCTTAG GGAGGCTGTG GAGTGGCCGC TTAAATATCC GGAAAAGTTT
AAGAAGTTCG GCCTTAGGCC GCCGAAGGGG ATTCTGCTCT TTGGGCCACC AGGTACGGGG
AAGACCCTAC TCGCCAAGGC GGTGGCCACG GAGTCGGGGG CCAACTTCAT AGCCGTTAGG
GGGCCTGAGA TCTTCTCTAA GTGGGTTGGC GAGAGCGAGA AGATGGTGAG AGAGATATTT
AGGAAGGCGC GAATGGCGGC TCCCGCTGTT GTTTTTATTG ACGAAATTGA TGCCTTGGCC
ACTGCAAGGG GGTTTGGCGG GGATTCCCTA GTCAGCGAAC GCGTAGTGGC TCAACTATTG
GCGGAAATGG ATGGCATAAA GGCGTTGGAG AACGTAGTCG TCATCGCGGC GACTAATAGG
CCTGATTTAG TAGACCCGGC GTTGCTGAGG CCTGGGCGCT TCGACAGGAT TATATACGTG
CCGCCACCCG ATTACAAGGC GCGGCTTGAC ATATTACTAA TACATACGAG GGCCACGCCG
CTTGCCAAGG ACGTAGGCCT AGAAGAACTA GCCAGGAGGA CCGAGGGATA TTCGGGCGCC
GATCTAGAGC TTCTGGTGAG AGAGGCCACC TTCTTGGCGT TGAGAGAGGA TATAAACGCG
AAGGAGGTGT CAATGAGACA TTTCGAAGAG GCGTTAAAAA AGGTGAGGCC CTCAGTGGCT
CCTGACATGC TTAAGTTCTA CGAGACTTGG CTAGAGAAGG CGAGGCAACT TACGGTGTCT
CCCAAGGCTA AGGCGACGCC GCCTCTGTAC CTATGA
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| Protein sequence | MSEWIELRVL ESKARDANRP VVRIDPEVME RTGIAVGDVI EIVGRRRTAA KVWNGLPEDR
GKGVIRMNSI LRKNADVSLN ETVKVRRVEP KPAAFVKLAP VSMTIAVDAN FLQYIKQRLR
EYVVVEGDML QIYVLSQPLT FQVVQTKPSN AILIITEDTQ IQIFEKPVSG VKIPHVTWED
IGDLEDAKQK IRELVELPLR HPELFKHLGI EPPKGILLIG PPGTGKTLLA KAVANEANAY
FVAINGPEIM SKYYGESEAR LREIFEEAKK NAPAIIFIDE IDAIAPKREE VTGEVEKRVV
AQLLTLMDGL QERGQVVVIG ATNRPDAVDP ALRRPGRFDR EIWINPPDFK GRYEILQIHT
RNMPLAPDVD LRKLAEITHG FSGADLAALA REAAMSALRR AIQSGLIDLN QPSIPPEVFE
QIKVTMADFT SALREIVPSA LREIHIEVPR VRWEDVGGLE NVKQELREAV EWPLKYPEKF
KKFGLRPPKG ILLFGPPGTG KTLLAKAVAT ESGANFIAVR GPEIFSKWVG ESEKMVREIF
RKARMAAPAV VFIDEIDALA TARGFGGDSL VSERVVAQLL AEMDGIKALE NVVVIAATNR
PDLVDPALLR PGRFDRIIYV PPPDYKARLD ILLIHTRATP LAKDVGLEEL ARRTEGYSGA
DLELLVREAT FLALREDINA KEVSMRHFEE ALKKVRPSVA PDMLKFYETW LEKARQLTVS
PKAKATPPLY L
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