Gene Pars_2339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_2339 
Symbol 
ID5054464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp2091968 
End bp2092354 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content54% 
IMG OID640469891 
ProductUspA domain-containing protein 
Protein accessionYP_001154535 
Protein GI145592533 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0225784 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATAGGA GAATCTTGGT GGCATATGAC GGCTCAGACC ACGCCAAAAA GGCTGTGGCT 
CACGCACTCG CCCTGGCAAA GGCCTTTGGT TCTTCGGTTT GTGTTATTAC AGTCGCAGTA
GATCCCTCAC AAGCGTCTTT AGACAAAGCC CAGAAAATCG CGTCTGAAGC CGCCGAAGCT
TTGAAATCTC AGGGAGTAGC GCTGGAAGAA GTAGCTGTTA GGTCTGGCAC ACCCGCAACG
GAGATTCTAA ACTACGCAGA GGAGAAAGGG GTGGACCTCA TCGTGATGGG CTCCCGAGGC
CTCTCAGCGC TACAGAGGTT GGTCCTAGGC TCAGTATCAC AAGCGGTGGC GTCAAGAGCA
AGGGTACCTG TCCTCATCGT GAGGTAG
 
Protein sequence
MYRRILVAYD GSDHAKKAVA HALALAKAFG SSVCVITVAV DPSQASLDKA QKIASEAAEA 
LKSQGVALEE VAVRSGTPAT EILNYAEEKG VDLIVMGSRG LSALQRLVLG SVSQAVASRA
RVPVLIVR