| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_2332 |
|---|
| Symbol | |
|---|
| ID | 5054325 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | + |
|---|
| Start bp | 2085863 |
|---|
| End bp | 2086123 |
|---|
| Gene Length | 261 bp |
|---|
| Protein Length | 86 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640469884 |
|---|
| Product | like-Sm ribonucleoprotein, core |
|---|
| Protein accession | YP_001154528 |
|---|
| Protein GI | 145592526 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1958] Small nuclear ribonucleoprotein (snRNP) homolog |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00160681 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.000613176 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAAAT CTCCACAGCA AGTTAAGCTA CCCTCTCCAA TAAAGGTGCT TACTAAGATG
CTTAACAAGG AGATAGTTGC TAAGCTTAAG GGAGGTGTCG CAATAAAAGG TGTTTTGACG
GCGTACGATG GTTGCATGAA TCTGGTTCTC GACAGTGCCG CCGAGCTGGA TAATTCCGGT
GAACCTAAGA CGCGCTATGG ACGAATTGTG GTTCGAGGTA GCCAGGTGAT ATATGTCTCG
GCTCTGGAGG TGACACCATG A
|
|---|
| Protein sequence | MSKSPQQVKL PSPIKVLTKM LNKEIVAKLK GGVAIKGVLT AYDGCMNLVL DSAAELDNSG
EPKTRYGRIV VRGSQVIYVS ALEVTP
|
|---|
| |