Gene Pars_2330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_2330 
Symbolrps9p 
ID5055420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp2085190 
End bp2085624 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content51% 
IMG OID640469882 
Product30S ribosomal protein S9P 
Protein accessionYP_001154526 
Protein GI145592524 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0103] Ribosomal protein S9 
TIGRFAM ID[TIGR03627] archaeal ribosomal protein S9P 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000018587 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0000157231 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATGTGC GTAGTGCGAA GGTTTTGCAG GAGAGCCCTC GGGTGGTGAT TTCGGTTGGG 
AAGAAAAAGA CTGCCGTGGC TAGGGCTGTG ATAAGGCCTG GGATTGGTCG TGTTAGAGTC
AATGGATATC CCTTAGAGTC GTGGCCTATT GAAATGGCTA GGGTTAAGAT GCAGGAGCCT
TTAATGCTTG CCGGCGATCT TGCTAAGAAG GTTGATATTG ATGTAAACGT ATCGGGCGGC
GGCTTTATGG GACAGGCCGT GGCTGTGAGG ATTGCAATCG CAAGGGGCTT AGTGGCGTAT
TTCCAGAGCC AAGAGCTAAA AGAGCTGTAC GAAAAATACG ACCCGTATAT GCTTAAAGGA
GACCCCCGCA GGACGGAGCC GAAGAAGCCA GGTATAAAAC ACGCAAGAAG CAAGAGGCAG
AAGGCCTATA GATGA
 
Protein sequence
MDVRSAKVLQ ESPRVVISVG KKKTAVARAV IRPGIGRVRV NGYPLESWPI EMARVKMQEP 
LMLAGDLAKK VDIDVNVSGG GFMGQAVAVR IAIARGLVAY FQSQELKELY EKYDPYMLKG
DPRRTEPKKP GIKHARSKRQ KAYR