Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_2324 |
Symbol | |
ID | 5056337 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | + |
Start bp | 2081831 |
End bp | 2082145 |
Gene Length | 315 bp |
Protein Length | 104 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640469876 |
Product | 50S ribosomal protein L30e |
Protein accession | YP_001154520 |
Protein GI | 145592518 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1911] Ribosomal protein L30E |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00112363 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00000131397 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGGCCCTCG TGATTGATAT AGGCAGAGAG CTCCAAGTAG CGATCAACAC GGGAAGCGTG GTTATAGGCT TCGAAGAAAC GAGAAGAGCA TTGTTGGCGG GTACGCCTAA GTTGGTAATT ATAGCGGCAA ACGCGCCTAA GTGGGCAAAA GACGATATTG AATACTACGC CAAACTAGCC GGCATTCCGA TATTTGTTTT TCCCGGCTCG AGCATAGAGC TGGGCGCTGC GGCTAAGAGG CCGCATAAAA TAATGGCACT GGCAGTGATC GACCCTGGCC AAAGCGAGAT TTTGAAATTA ACAGAACATG CCTGA
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Protein sequence | MALVIDIGRE LQVAINTGSV VIGFEETRRA LLAGTPKLVI IAANAPKWAK DDIEYYAKLA GIPIFVFPGS SIELGAAAKR PHKIMALAVI DPGQSEILKL TEHA
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