| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_2323 |
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| Symbol | |
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| ID | 5056336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum arsenaticum DSM 13514 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009376 |
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| Strand | + |
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| Start bp | 2080652 |
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| End bp | 2081791 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640469875 |
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| Product | DNA-directed RNA polymerase subunit A'' |
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| Protein accession | YP_001154519 |
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| Protein GI | 145592517 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02389] DNA-directed RNA polymerase, subunit A'' |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0147496 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00000206974 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGATCTCGA AGCAGGAGCT TTTGGCAAAA ATACAACACG TACTGCCGAG GCCGCTGTAC
GCTGAGATTG AAAACGCAGT GAAGGATCTA GACGATGAGA GGGCCCTCCG CCTCATATAC
CGCGTGCTGA GGCTTTACCT AAACTCGTTG ATAGACCCTG GGGAGGCCAT AGGTATTGTA
ACGGCGCAGT CGATAGGCGA GCCGGGCACC CAGATGATCC TCCGCTCTTT CCACTACGCG
GGTCTGAGGG AGTTCTCCAT GGCGCGTGGT CTGCCGAGGC TTATAGAGGT GGTTGACGCC
CGGAGGACTC CCTCAACGCC TTTGATGTAT ATCTATTTGA AGCCTCCGCA TAATAAGAGC
CGAGAGGCGG CGGAGGCTGT GGCAAAGAAG ATACAACAAG TAACTCTAGA GATGTTGGCA
AAGGAGGTGG ATGTAGATTA TATAAGTGGC GCCGTCACAA TTGAGCTGGA CACAGAGCAG
TTGAAGTATA GAGGTTTGAA CATAAAGGAG GTGGAGAAGA TTGTCAGCAA GGCGAGGGGG
AAGGACTTGT CAATCTCTTT CCGTGGCCAC ACAATTACAG TTACGCTTAC CTCGCCTGAT
ATTTTTAAGC TAAGAAAAGT CAGAGATAAG ATACTGCAGA TAAAAGTAGC TGGGATAAAG
GGAGTGAGGA AAGTGGTGCT CCAGTACGAC TCAAAAGCAG ATGAGTGGTT TATCGTAACT
GAGGGGACAA ACTTGGAGGC GGTGCTACAA CTTGAGGAGG TAGACGCCAC GAGAACCTAC
AGCAACGATC TCCACGAGGT GGAGGAGGTG TTAGGCATAG AGGCGGCCAG GGCTTTAGTG
GCACAAGAAA TCAAGAGAGT TCTTGACGAG CAGGGCCTAG ATGTTGATAT TAGGCATATG
TACATGGTGG CTGACACCAT GACTTGGTCA GGTAGGCTCA GGCCAATAGG ACGGCACGGA
GTTGTTGGGA CTAAGGAATC CCCCTTGGCG CGCGCCGCCT TTGAGGTCAC CGTCAAGACG
CTGATTGAGG CCTCTGTAAG AGGCGAAGAG GAGGCCTTTA AGGGAGTGGT CGAGAGCATA
ATTGCGGGGA AGTATATACC CATCGGTACC GGCATCGTGC GCCTTTTGAT GCAGTTCTAA
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| Protein sequence | MISKQELLAK IQHVLPRPLY AEIENAVKDL DDERALRLIY RVLRLYLNSL IDPGEAIGIV
TAQSIGEPGT QMILRSFHYA GLREFSMARG LPRLIEVVDA RRTPSTPLMY IYLKPPHNKS
REAAEAVAKK IQQVTLEMLA KEVDVDYISG AVTIELDTEQ LKYRGLNIKE VEKIVSKARG
KDLSISFRGH TITVTLTSPD IFKLRKVRDK ILQIKVAGIK GVRKVVLQYD SKADEWFIVT
EGTNLEAVLQ LEEVDATRTY SNDLHEVEEV LGIEAARALV AQEIKRVLDE QGLDVDIRHM
YMVADTMTWS GRLRPIGRHG VVGTKESPLA RAAFEVTVKT LIEASVRGEE EAFKGVVESI
IAGKYIPIGT GIVRLLMQF
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