| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_2322 |
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| Symbol | |
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| ID | 5054559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum arsenaticum DSM 13514 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009376 |
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| Strand | + |
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| Start bp | 2078001 |
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| End bp | 2080655 |
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| Gene Length | 2655 bp |
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| Protein Length | 884 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640469874 |
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| Product | DNA-directed RNA polymerase subunit A' |
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| Protein accession | YP_001154518 |
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| Protein GI | 145592516 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02390] DNA-directed RNA polymerase subunit A' |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0946262 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0000535013 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTCGTTAA AGGAGGAACT TGACACTATT CCTCGTAAGG TGATTAAATC TATAAAATTC
GGAGTCCTTA GCCCAGAGGT TATTCGAAAG TACTCGGTGA TGGAGGTGAC AACATCGGAA
GTGTACGATG AAGGCGGCTT ACCGGTGAGG GGTGGTATTT CTGACCGGAG GCTGGGGGTG
GCCGAGCCCG GGGCACGTTG CGAGACGTGT GGTCAAACTC ACGATGTTTG TCCGGGCCAT
TTTGGACACA TAGAGCTGGT TAAGCCTGTG GTTCACGTTG GTTTTGCCCG TGTGATATAT
GACATTTTGA GAACTACTTG TCCCAACTGC GGGCGCATAA TGCTCCGCGA CGAGGAGATT
GCGCGGTATA GGGAGAGGCT GACTAGGCTT AGTAAGAGGT GGCGTCTGCT TGCGCAGAAC
CTGCACGAGA GAATTAGGAG GAAGGCGGCG GAGCGTATGA CTTGTCCCCA CTGTGGGTAT
AAGCGGAATA AGGTAAGGTT TGAGCGGCCG TACTACTTCT ACGAGGAGAC TGAGAATGGC
GCCTTGGTTA AGCTTGATCC CGAGATGCTG AGAGATAGGC TTAGTAAGAT ACCGAGTGAA
GACTTGGAGC TTCTTGGGAT CAACCCTTCT GTTTTCCGGC CCGAGTGGGC AATTCTTAAG
GTGTTGCCCG TTCCGCCTCC GCATGTGAGA CCTTCTATAC AGCTGGAGAC CGGTATTAGG
TCGGAGGACG ACTTAACTCA CAAGCTTGTG GATATTATTA GGATGAACGA GAAGCTTAAA
ATCGCCATTG AGACCGGCGC TCCTACTAAC GTGGTGGACA ACCTCTGGGA CCTCCTCCAG
TACCACGTCG CTACTTACTT TGACAACGAG CTCCCGGGGA TCCCGGTGGC TAAGCACAGG
GGCGGGAGGC CGCTTAAGGG GATAGCCCAG CGCCTAAAGG GCAAGGAGGG GCGCTTCAGG
GGATCTCTCA GCGGGAAGCG CGTGAACTTC TCGGCGCGTA CGGTCATCAG CCCCGACCCC
CACATCAGCA TAAACGAGGT TGGAGTGCCT ACTGATATCG CCAAGATTTT GACTGTGCCG
GAGAAGGTGA CTGCTTGGAA TATAGACGTG CTACGGGAGT ACGTGATCCG CGGCCCCGAG
ACTTGGCCAG GGGCGAACTA CGTCGTGACG CCCGAGGGGA GGAGGATAGA TCTACGCTAT
GTGAAGGACA GGAAGGCCCT CGCGGAGAGG CTGGCCCCGG GTTGGGTGGT AGAGAGGCAC
TTAAGAGACG GCGACATTGT TCTTTTCAAC AGACAGCCTT CTCTTCACAG GGTGTCTATG
ATGGGCCACT TGGTCAAGGT GTTGCCGGGG AGGACGTTTA GATTGCACCT GGCCGTGTGT
CCTCCGTATA ACGCTGATTT TGACGGGGAC GAGATGAACC TCCATGTGCC GCAGACGGAG
GAGGCTAGGG CGGAGGCGAG GTTGTTAATG CTGGTGGAGA ATCACATAAT CACTCCGCGC
TACGGCGGTG CCATTATCGG AGCGAGACAA GACTACATAA TCGGGGCCTA TCTGCTTTCT
CACAAAACTA CTTTCTTAAC TAAGAAGGAG GTGGCCTTCC TCCTGGGCGC GGGTAAGTCG
GAGGAGGATC CACCGGAGCC GGCGATACTC TACCCCGTAG AGCTGTGGAC GGGTAAGCAG
ATTATCTCCC ACTTCCTACC GAAGGATTTC AACTGGGTGC AACCCACCGC TTTTAAGTCG
AAGTGCCAAG ACGCCTATAC TTGCTATGGC GATGAGTGGA TTATCGTGCT GAACGGCTAC
TTAGCAAAGG GGGTGTTGGA CAAAAAATCG ATAGGCGCCG AGCAGGTGGA CTCTCTCTGG
CACCGCATTG CCCGAGACTA CCCGCCGGAT GTGGCGAGGA GGTGGCTTGA CTCGTCTCTC
CGGTTGTTCC TAAGGTATCT TGATCTACGC GGCTTCACCT TTGCCATGGA CTCAGTCTAT
ATACCTACGG AGGCGTATAG GGAGGTGGAA GAAGTCATAG AGCAGGCCTT GAAGAAGGTT
GAAGGACTTA TCGAGGATTT CACAAGCGGG CGTCTTGAGG CCATGCCCGG CTTTACGGTG
GAGGAGACGT TTGAAAACAA GGTTACAGAT ATCTTGTCAA GAGTTCGCGA AGACGCGGCG
CAGGTTGTGG AGAAGTATAT TGATAAGAAC TCTGAGGGCT ACCTAATGGC TAAGACCGGC
GCTAGGGGTA GTCTCGTTAA CATAGTGCAG ATGGTCGCCA CGCTGGGCCA GCAGACTATC
CGGGGCGAGC GCATTAGGCG GGGCTTTAGA AGTAGGACGC TTCCTCACTT CCCTGTGGGG
GATATAGGCG CCTTTTCTGG GGGCTTTGTT AAACATTGCT TTAGGTGCGG CCTCACGCCT
GTTGAGTATT TCTTCCACGC GGCGGCGGGT AGAGATGGGT TGATAGACAC GGCGGTGCGC
ACGGCGCAGT CAGGCTACAT GCAGAGGCGT CTTATCAACG CGTTGCAAGA CGTCTACGTG
GCCTACGATG GGACCGTGAG GTTTGGCGGC TCTATGCTAC TCCAGCCCCT ATACGGCGAA
GACGGCGTTG ATGTGAGCCG TTCAGACCAC GGCAAGGTCA CAGACATAAA GCTACTCAAG
ATGTGGATAA GATGA
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| Protein sequence | MSLKEELDTI PRKVIKSIKF GVLSPEVIRK YSVMEVTTSE VYDEGGLPVR GGISDRRLGV
AEPGARCETC GQTHDVCPGH FGHIELVKPV VHVGFARVIY DILRTTCPNC GRIMLRDEEI
ARYRERLTRL SKRWRLLAQN LHERIRRKAA ERMTCPHCGY KRNKVRFERP YYFYEETENG
ALVKLDPEML RDRLSKIPSE DLELLGINPS VFRPEWAILK VLPVPPPHVR PSIQLETGIR
SEDDLTHKLV DIIRMNEKLK IAIETGAPTN VVDNLWDLLQ YHVATYFDNE LPGIPVAKHR
GGRPLKGIAQ RLKGKEGRFR GSLSGKRVNF SARTVISPDP HISINEVGVP TDIAKILTVP
EKVTAWNIDV LREYVIRGPE TWPGANYVVT PEGRRIDLRY VKDRKALAER LAPGWVVERH
LRDGDIVLFN RQPSLHRVSM MGHLVKVLPG RTFRLHLAVC PPYNADFDGD EMNLHVPQTE
EARAEARLLM LVENHIITPR YGGAIIGARQ DYIIGAYLLS HKTTFLTKKE VAFLLGAGKS
EEDPPEPAIL YPVELWTGKQ IISHFLPKDF NWVQPTAFKS KCQDAYTCYG DEWIIVLNGY
LAKGVLDKKS IGAEQVDSLW HRIARDYPPD VARRWLDSSL RLFLRYLDLR GFTFAMDSVY
IPTEAYREVE EVIEQALKKV EGLIEDFTSG RLEAMPGFTV EETFENKVTD ILSRVREDAA
QVVEKYIDKN SEGYLMAKTG ARGSLVNIVQ MVATLGQQTI RGERIRRGFR SRTLPHFPVG
DIGAFSGGFV KHCFRCGLTP VEYFFHAAAG RDGLIDTAVR TAQSGYMQRR LINALQDVYV
AYDGTVRFGG SMLLQPLYGE DGVDVSRSDH GKVTDIKLLK MWIR
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