| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_2321 |
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| Symbol | |
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| ID | 5054542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum arsenaticum DSM 13514 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009376 |
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| Strand | + |
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| Start bp | 2074588 |
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| End bp | 2077971 |
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| Gene Length | 3384 bp |
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| Protein Length | 1127 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640469873 |
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| Product | DNA-directed RNA polymerase subunit B |
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| Protein accession | YP_001154517 |
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| Protein GI | 145592515 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR03670] DNA-directed RNA polymerase subunit B |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.388752 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.000074653 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTTGATC TACTTCCTCT ACCCGTGATA TCACCCTCTG GAGACGGAGG GCTTCTTACA
AAAGACGATA GGTGGGCCTT GGTGGAGAGG TTTATAAAAG ACAAGGGGCT CGCCAGCCAC
CAGATAAAGT CTTTCAACGA CTTCCTAGAC AAGAAGCTCC CCCGCATTGT CGAGGATTTC
AAGGTGGTTG ATACAGAGAT TAAGGGGCTG AAACTGGTGT TGGAGAAAAT CGAGGTTGGG
TGGCCGAGGA TTAAGGAGTC GGACGGTTCC GAGTCCCTTA TCTACCCCAT GGAGGCTCGG
CTCCGCAACG CCACCTACTC GGCGCCCTTG TACCTAACCG CGGTTTTGTA CGTAGATGAT
GAGCCCTACG CCACAGAAAC GTTCTACATA GGGGAGTTGC CCATAATGGT TAAGTCGAAA
CGTTGCAACT TGACCCGGCT GAGGCCAAGT GAGTACCCTA AGAGGTTTGA GGACCCCCAA
GACTTCGGCG GCTACTTTAT CATAAACGGG AGCGAGCGGG TTATTATAAG CCAGGAGGAC
CTCGTCGCTG ATAGGCCAAT TTACGACAAG GGCGACAAGC CCTCCGTGAA GTTCTTGGCC
AAGACTATAT CCACCGGCAT AGGGTACAGA AGCACGTTGA CTGTTGAGCT GAACAAAGAC
GGGGTGATTT ACGCCACGCT TTCGGCAATA CCCGTCAAAA TACCCTTCCC CATTTACATG
AAGGCTCTCG GCCTCGAGAC AGACGAGGAC GTGGTGAAGG CCGTGTCGGA CGACCCAGAC
ATACAGAAAG AGCTCCTCCC CTCACTCGTG GTTGCCAACC AGATAGCGAT AACCCGCGAA
GACGCGCTTG ACTACATAGG CGGCAAGGTG GCAGTGGGGC AACCCCGGCC CGTCAGAGTG
GAGCGGGCGT TGCAACTGCT AGATAGGTAC TTCCTGCCTC ACCTTGGCAC CACGGTGCCG
GATGAGAAGA AGCAACAAGA AATTAGGCTG AAAAAGGCGC TGATGCTGGG GCAAATTGTT
AAGGGTCTTG TGGAGCTCCA GCTGGGGAGG AGGAAGCCCG ACGATAAGGA CCACGTGGCA
AACAAGAGGG TGCGCTTAGT TGGCGACTTG ATGACCCAGC TCTTCCGCAC GGTGTTTAAG
CAGTTGCTCC AGGAGCTGAG GAGCCAGCTG GAGAAGTACT ACGCCAGGGG GAGGATACCC
CACCTGCAGA CAATTGTAAG GCCGGACATA ATAACCGAGC GCGTCAGGCA AGCCCTAGCT
ACGGGTAACT GGGTAGGGGG CAAGACGGGT GTCTCCCAGA TTTTAGACCG CACCAACTAC
CTCTCCACTC TGAGCTACCT GAGGCGTGTT GTGTCCTCCC TATCCAGGAC CCAGCCCCAC
TTCGAGGCCC GCGACCTCCA CCCAACCCAG TGGGGGAGGC TGTGCGCAGT TGAGACGCCT
GAGGGCCAAA ACGTGGGGCT TGTGAAGAAC CTCGCCCTCC TCGCCGAGAT AACCACTGGT
GTGGACGAAA ACGATGTTGA ACAGATGCTC TTACAGCAGG GCGTCGTGCC TATACTAAAA
GCTAGAGAGG AGGGGGTCCG TGGCGCCGAG GTCTACCTAA ACGGGAGGCT GATAGGTATC
CACCCAGAAC CGGAAGAATT GGTAAAGACG GTAAGGAGCT TGAGGAGGCA GGGCAAGATA
AGCGATGAGA TAAACATCGC TTACCTCAAC GGCGTCGTTT ACGTGAACAG CGACGGGGGG
CGCATAAGGA GGCCTCTCCT AGTCGTGGAA GACGGGAAGC TGAAACTCAC AAAGGACATT
GTTGAGAGGG TGAAGAGGGG GGAGCTCACC TGGGACGACC TATTAAAAAT GGGCGTAGTG
GAGTACCTAG ACGCCGACGA AGAAGAAAAC GCCCACATAG CTGTTGACCC CGAGGGCGAC
CTAAGCAATT ACACCCATGT GGAGATTATA CCATCCTCCA TCCTGGGGGC AATTGCCTCG
ATTATACCCT TCCTAGAGCA CAACCAGTCG CCGAGAAACC AATACGAGGC CGCGATGGCC
AAGCAGAGTC TGGGCTTGCC GCAGTCCAAC TTCTTGTACA AGCTGGACTC CAGAGGTCAT
ATGTTGTACT ACCCAGAGAG GCCGATAGTG ACTACCAGGG GTCTGGAGTT GGTGGGTTAT
TCGAAGCGGC CTGCAGGCCA GAACGCCGTA GTGGCTCTGC TCACCTATAC GGGGTACAAC
ATCGAGGATG CCGTCATCCT AAACAAGGCG TCAGTGGAGC GCGGCATGTT CCGCTCGGTG
TTCTACCGCA CATACGAGAC GGAGGAGCAG AGATACCCAG GCGGCGAGGA GGACAAAATC
GAAATACCTG ACAGCTCGGT CAAGGGGTAT AGGGGGCCAG AGGCCTACAG CCACCTAGAC
GAAGACGGCA TAGCCCCGCC TGAGGTGTAT GTGAGTAGCA GCGAGGTGTT GATAGGCAAA
ACATCTCCGC CGAGGTTCTA CACCACGCTG GAGACAGAGC GGATACTGAA AGAGAGACGT
GACGCCTCGG TGGCCGTAAG GCGCGGGGAA AAGGGTATAG TGGACAGGGT CATAGTCACG
GAGTCTCCCG AGGGCAACAA GCTTGTTAAG GTGAGGCTGA GGGAGCTCAG AATTCCGGAG
CTCGGCGACA AGTTCGCAAG CCGGCACGGC CAGAAGGGAG TTGTGGGGAT GTTGCTTAGA
CAAGAGGATA TGCCATTCAC AGAGGAGGGC ATTGTCCCCG ACATAATCGT AAACCCACAT
GCCCTGCCCT CGCGTATGAC CGTCGCCCAG TTGCTAGAAA GCATGGCCGG GAAGGTCGGC
GCCGCCACAG GGAACCTAGT AGACGCCACA CCCTTTGAGG GGGTAAAGGA GGAGGACTTG
AGGAAGCTGT TGCTAAAACT CGGCTACAAG TGGGACGGCA AAGAGGTCAT GTACAGCGGC
ATAACCGGCG AGAAGCTCGT AGCGGACATC TTCATAGGCA TTGTGTACTA CCAGAAGCTA
CACCACATGG TAGCCGACAA GATACACGCC CGCGCTAGGG GCCCCGTGCA GATCCTCACG
AGACAACCCA CCGAGGGCCG CTCCCGCGAA GGCGGCCTAA GGCTGGGAGA GATGGAGCGC
GACGTCTTGA TAGCGCACGG CGCCTCGGCG TTGCTCTACG AGAGGCTTGT GGAGTCGAGC
GATAAGTACA CGATGTATGT CTGCGAGCTG TGCGGCCTGC CGGCGTATCT GGATGCCAAG
AGTAATAAGC CGAAGTGCCC AATCCACGGC GATACGGGGC AGTTCGCCAA GGTCACGGTG
CCCTATGCCT TTAAGCTTCT GCTTCAAGAG CTGATTGCGC TGGGTATATA CCCCAAGCTG
GAGCTCTCTG AGGTGCTGGA CTAA
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| Protein sequence | MVDLLPLPVI SPSGDGGLLT KDDRWALVER FIKDKGLASH QIKSFNDFLD KKLPRIVEDF
KVVDTEIKGL KLVLEKIEVG WPRIKESDGS ESLIYPMEAR LRNATYSAPL YLTAVLYVDD
EPYATETFYI GELPIMVKSK RCNLTRLRPS EYPKRFEDPQ DFGGYFIING SERVIISQED
LVADRPIYDK GDKPSVKFLA KTISTGIGYR STLTVELNKD GVIYATLSAI PVKIPFPIYM
KALGLETDED VVKAVSDDPD IQKELLPSLV VANQIAITRE DALDYIGGKV AVGQPRPVRV
ERALQLLDRY FLPHLGTTVP DEKKQQEIRL KKALMLGQIV KGLVELQLGR RKPDDKDHVA
NKRVRLVGDL MTQLFRTVFK QLLQELRSQL EKYYARGRIP HLQTIVRPDI ITERVRQALA
TGNWVGGKTG VSQILDRTNY LSTLSYLRRV VSSLSRTQPH FEARDLHPTQ WGRLCAVETP
EGQNVGLVKN LALLAEITTG VDENDVEQML LQQGVVPILK AREEGVRGAE VYLNGRLIGI
HPEPEELVKT VRSLRRQGKI SDEINIAYLN GVVYVNSDGG RIRRPLLVVE DGKLKLTKDI
VERVKRGELT WDDLLKMGVV EYLDADEEEN AHIAVDPEGD LSNYTHVEII PSSILGAIAS
IIPFLEHNQS PRNQYEAAMA KQSLGLPQSN FLYKLDSRGH MLYYPERPIV TTRGLELVGY
SKRPAGQNAV VALLTYTGYN IEDAVILNKA SVERGMFRSV FYRTYETEEQ RYPGGEEDKI
EIPDSSVKGY RGPEAYSHLD EDGIAPPEVY VSSSEVLIGK TSPPRFYTTL ETERILKERR
DASVAVRRGE KGIVDRVIVT ESPEGNKLVK VRLRELRIPE LGDKFASRHG QKGVVGMLLR
QEDMPFTEEG IVPDIIVNPH ALPSRMTVAQ LLESMAGKVG AATGNLVDAT PFEGVKEEDL
RKLLLKLGYK WDGKEVMYSG ITGEKLVADI FIGIVYYQKL HHMVADKIHA RARGPVQILT
RQPTEGRSRE GGLRLGEMER DVLIAHGASA LLYERLVESS DKYTMYVCEL CGLPAYLDAK
SNKPKCPIHG DTGQFAKVTV PYAFKLLLQE LIALGIYPKL ELSEVLD
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