Gene Pars_2289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_2289 
Symbol 
ID5054682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp2049817 
End bp2050287 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content59% 
IMG OID640469841 
Producthypothetical protein 
Protein accessionYP_001154485 
Protein GI145592483 
COG category[S] Function unknown 
COG ID[COG2090] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.904061 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.190506 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCACCG AGGCCGAGGA ATGCCTGGAG AACGTTCTAA GAGGCGTGTC TCCCGCCGAC 
GTATTTACGG CGAGAGGCCA CCCCAACATA ACAGCTACGA ACAGAAAGAC GCTAGAAATC
ACCAAAGACC CCTACGTCAC TAGGCGAGGG GACTGCATAG TGGCGTGTTG CGCCGAAAAG
GCGGCAGGAG AGTTGAGGCG AGACGTGCTA CAGGCACTAA CCGCCCCGGG GGTCGTAGTC
GTAATCCTCA GCACAGGGTC CGCCTGGGAC TACGCCGCCG GAGAGACCCC CCGCGTGGCA
CCAACTTCGA CCTGGCGCAT CGTTGTTCGT ACGAGCACTT ACGTGGACGA ATCCACCGTT
GCCATAAGAG CCGGCAAAAG CGCCGCTGAC CTGGATAGGA GATTAATCCA GGAGCTGAGA
CGAGGCGTAC ACCTTAGGGT GGTCATAGGA GTCTGCCCAC TTAGTGTATA A
 
Protein sequence
MPTEAEECLE NVLRGVSPAD VFTARGHPNI TATNRKTLEI TKDPYVTRRG DCIVACCAEK 
AAGELRRDVL QALTAPGVVV VILSTGSAWD YAAGETPRVA PTSTWRIVVR TSTYVDESTV
AIRAGKSAAD LDRRLIQELR RGVHLRVVIG VCPLSV