Gene Pars_2288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_2288 
Symbol 
ID5054072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp2049108 
End bp2049824 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content58% 
IMG OID640469840 
Producthypothetical protein 
Protein accessionYP_001154484 
Protein GI145592482 
COG category[I] Lipid transport and metabolism 
COG ID[COG0170] Dolichol kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.214968 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTATAAAA GCTGGCTTTT ACACCCAGCC GTGTCACAAA TAGAAGAGCT GAGGAGGCTG 
GCCGCCAGGA AGATGTTCCA CGTAGCCTTC GTCGCGCTAC TGGCATTACC CTTCGTGGTG
GGCATTCCGC TAGAGACGTA TACGGCCATC CTCGCGTTCA TCGGCGGCGT AGTCTACTCT
ATACAAGTAA GACAGCCTGC GGTGTGGGAG CAGTTAAGGG AAGACTTTTT CAAGACGCTA
GAAGACGTCT TCACGCGGCT AGAGCAACTA CTTCCCCTAG ACAAACCCGG CGTCCGCGAG
CAGTACGCCA AGGCCGTCCG CCAGTTTGAA GAACTGGTGC TCATGGCCGA ACGGGACTAC
GAAAAGAGGC ACGGCTACCT CGGCATACTG ATGGGTGCCG TGGGGTTCCT TATTGCTGAA
TCCATCTTTG GAAGAGGGCA CCTTCTGCCC GCGCTGATAA GTCTCGGAGT CTACGACGCC
GTCAGCGCCG TCGCCGGGAC GGCGATGGGG GGCAGAAGAA TAGGCAAAGT ATCGCTTTGG
GGCACTACGG CGGGGGCGCT GGCAAATATC CTCGCCTTAG TTGCGGCGGG GGCGCCCGTG
GGAGCCGCGT TGCTCATAAC AGCGATGGTT GTGTTAGCCG ACGTGGTCAG CCCCGAGGAC
AACTTGACAA TCCCCGTCGC CGCCGCCGCA GGGTCGTATC TATATCACCT CCTGTAG
 
Protein sequence
MYKSWLLHPA VSQIEELRRL AARKMFHVAF VALLALPFVV GIPLETYTAI LAFIGGVVYS 
IQVRQPAVWE QLREDFFKTL EDVFTRLEQL LPLDKPGVRE QYAKAVRQFE ELVLMAERDY
EKRHGYLGIL MGAVGFLIAE SIFGRGHLLP ALISLGVYDA VSAVAGTAMG GRRIGKVSLW
GTTAGALANI LALVAAGAPV GAALLITAMV VLADVVSPED NLTIPVAAAA GSYLYHLL