Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_2288 |
Symbol | |
ID | 5054072 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | - |
Start bp | 2049108 |
End bp | 2049824 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640469840 |
Product | hypothetical protein |
Protein accession | YP_001154484 |
Protein GI | 145592482 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0170] Dolichol kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.214968 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTATAAAA GCTGGCTTTT ACACCCAGCC GTGTCACAAA TAGAAGAGCT GAGGAGGCTG GCCGCCAGGA AGATGTTCCA CGTAGCCTTC GTCGCGCTAC TGGCATTACC CTTCGTGGTG GGCATTCCGC TAGAGACGTA TACGGCCATC CTCGCGTTCA TCGGCGGCGT AGTCTACTCT ATACAAGTAA GACAGCCTGC GGTGTGGGAG CAGTTAAGGG AAGACTTTTT CAAGACGCTA GAAGACGTCT TCACGCGGCT AGAGCAACTA CTTCCCCTAG ACAAACCCGG CGTCCGCGAG CAGTACGCCA AGGCCGTCCG CCAGTTTGAA GAACTGGTGC TCATGGCCGA ACGGGACTAC GAAAAGAGGC ACGGCTACCT CGGCATACTG ATGGGTGCCG TGGGGTTCCT TATTGCTGAA TCCATCTTTG GAAGAGGGCA CCTTCTGCCC GCGCTGATAA GTCTCGGAGT CTACGACGCC GTCAGCGCCG TCGCCGGGAC GGCGATGGGG GGCAGAAGAA TAGGCAAAGT ATCGCTTTGG GGCACTACGG CGGGGGCGCT GGCAAATATC CTCGCCTTAG TTGCGGCGGG GGCGCCCGTG GGAGCCGCGT TGCTCATAAC AGCGATGGTT GTGTTAGCCG ACGTGGTCAG CCCCGAGGAC AACTTGACAA TCCCCGTCGC CGCCGCCGCA GGGTCGTATC TATATCACCT CCTGTAG
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Protein sequence | MYKSWLLHPA VSQIEELRRL AARKMFHVAF VALLALPFVV GIPLETYTAI LAFIGGVVYS IQVRQPAVWE QLREDFFKTL EDVFTRLEQL LPLDKPGVRE QYAKAVRQFE ELVLMAERDY EKRHGYLGIL MGAVGFLIAE SIFGRGHLLP ALISLGVYDA VSAVAGTAMG GRRIGKVSLW GTTAGALANI LALVAAGAPV GAALLITAMV VLADVVSPED NLTIPVAAAA GSYLYHLL
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