Gene Pars_2287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_2287 
Symbol 
ID5056097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp2048779 
End bp2049120 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content58% 
IMG OID640469839 
ProductPilT domain-containing protein 
Protein accessionYP_001154483 
Protein GI145592481 
COG category[R] General function prediction only 
COG ID[COG1439] Predicted nucleic acid-binding protein, consists of a PIN domain and a Zn-ribbon module 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.191638 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGC CGTGTTTGGT CCTAGACGCC TCCGCCATAC TCCACGGAAG GGACGCAAGA 
ATTTTTTCTG GTAGGTTGCT CACCACTAGG GAGGTGGCTG AGGAGCTAAA AGATCCCCGG
GCGCAGGCCG CCTTGGAGAT CCTAGGTGTA GAGGTGGTGG AGGTGGACGG CAAGAAGGTG
GATGAGATGG CAAGAAGATT TAAGGAGCTG TCGCGCGCGG ACGTCTCTGT TCTTCTACTG
GCGCTTGAGA GACGATGCAC GTTGATAACA GACGACGGGA GGCTGGCGGC GGCGGCGAGA
AGGCTGGGGA TCCGCGTAGA GGGTGTTTTC TACAGGAGGT GA
 
Protein sequence
MSAPCLVLDA SAILHGRDAR IFSGRLLTTR EVAEELKDPR AQAALEILGV EVVEVDGKKV 
DEMARRFKEL SRADVSVLLL ALERRCTLIT DDGRLAAAAR RLGIRVEGVF YRR