| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_2285 |
|---|
| Symbol | |
|---|
| ID | 5054881 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | + |
|---|
| Start bp | 2046171 |
|---|
| End bp | 2048018 |
|---|
| Gene Length | 1848 bp |
|---|
| Protein Length | 615 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640469837 |
|---|
| Product | aldehyde ferredoxin oxidoreductase |
|---|
| Protein accession | YP_001154481 |
|---|
| Protein GI | 145592479 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2414] Aldehyde:ferredoxin oxidoreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.394139 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTAGTGT TTAAAATACT ACGCGTAGAT CTATCAACTG AAAAAATTAG TGAAGAGGTT
TATAAAGATG ATATAGTCCG CAAGTTCCTC GGCGGCCGGG GGCTGGGGGC CTACCTAATG
CTCAAGGAGC TCCCCCGCGG CATAGACCCA TTATCACCCT CAAACAAGCT GTACATCTTC
GCGGGGCCCC TCTCCGGCAC CGCCAACTTA GCCACAAGCA GAATAAACGT CGTGGGCAAG
AGCCCGCTCA CCGGTTCCTA CACCCACTCC AACGCTGGGG GCAACTTCGC ATACTGGCTA
ATGAGGACGG GGTACCACGG CATAGTCGTG GAGGGCAAAG CCGAGGAGCC TGTCTACATA
CTCGTCAAGG ACGGCGAGGT GTCGATACGC CCCGCCAAAC ACATTTGGGG GAAGTGGACC
GGTGCCGCCA CGAGGGCATT GCTCCAAGAC GCCGGGTTTG AACCCGATGA GAAGAAGGCA
GGGGTAATGA CCATAGGCCC CGCCGGCGAG AACCTCGTGA GAATTGCGGG GCTTAGGTTC
AGCGACTACG AGCGTTTCGC AGGCCGCGGA GGCCTCGGCG CTGTGGCGGG CTCCAAGAAA
CTGAAAGGCA TAGTGGTTTG GGGCACTCAC GACCCACTGA GGGAGTTCGT GGACAGACAG
AGGTTCCTCA AACTAGCGAC GGAATACTCG GTTAAGATGA TGAACGCCGC GACTCCAAAA
TCGCTCCACC AGTACGGCAC AAATCTGTTG ACAAACATAA TAAACTCAAT CGGCGGCTAC
CCTACAAGGA ACTTTGACAC AGGCTATTTC GAGGAGGCCG AAAAGATAAG CGGTGAGTAC
ATAAAGCAGA ACTATGTAAA AGAAACTCAT GGATGTATGT TATGTCCCAT ACAGTGTACG
CAGATGACAG TCGTCACAAC CGGCCCATAC AAAGTGGCGG GCGAGAGGAT TAAGTACGAG
TACGAGTCGA CGTGGGCTCT GGGCGGTAAT TTGGGCTTGT CGAATACTGA GGCTGTGCTG
AAAATGGAGA AGTTGGCTAA CGAGCTAGGC ATGGACACTA TTTCGCTTGG CAATACCCTG
GGCACATTCT TAGAACTAGT AAAGAGGGGT AAGATTAAGT ATGACATTGA CTGGGGCGAT
GCCGGGGCGT TGATCGACTT GGTATACAAG ACGGCTTACA GAGACGGCAT AGGAGACGAC
CTTGCAGAAG GCGACTGGAG GCTGGCCAAC AAGTACGGAG CCCCAGACGC CTTTGTGGGG
TCGAGAGGGC AGGGCTTCCC GGCATACGAC CCGAGGGCGC TTAAAGGCTT CGCCATTTCT
TACGTCACGG CTAACCGTGG GGGGGACCAC CTAGAGGCGT ACTCGCCGAC TTGGGAGGTG
CTGGGGGTGC CGGAGAAGGT CGATCCGCTA TGCGAGACTT CCGAGTGCAT CTCGAAACAG
GTGAGGCTGG TTATATACGC CCAGCACCTC ATGGCGTTGG CAGATTCTGT TACTTTCTGT
AAATTCGACA CATTGGATAA GGATGGAATC TTTGAACAAC ACCTCGCCGA GTTGTTCAAC
GCGGCGTTTG GTTGGGATAC CACGCCTCAG GAGATGTTGA CGATTGGAGA GCGCATCTTC
AACGTGGAGA GGCTGTTCCA CGTGAAGGAG GGGAAGTGGG TTAAGGACGA GCTTCCGCCA
AAGATGAGAG AGCCGATTAA GACCGGCCCT GCGAAGGGCC ATACTGCGTC TAAGATGTTT
GACGAGGGCA TAAAGGAGTT CTACAAGCTG AGGGGCTGGG TTGATGGCAA GCCTACCTAT
GAGACGTTGA AGAGACTTGG GCTGGAGGAA TTCCAGTACC TCCAGTAA
|
|---|
| Protein sequence | MVVFKILRVD LSTEKISEEV YKDDIVRKFL GGRGLGAYLM LKELPRGIDP LSPSNKLYIF
AGPLSGTANL ATSRINVVGK SPLTGSYTHS NAGGNFAYWL MRTGYHGIVV EGKAEEPVYI
LVKDGEVSIR PAKHIWGKWT GAATRALLQD AGFEPDEKKA GVMTIGPAGE NLVRIAGLRF
SDYERFAGRG GLGAVAGSKK LKGIVVWGTH DPLREFVDRQ RFLKLATEYS VKMMNAATPK
SLHQYGTNLL TNIINSIGGY PTRNFDTGYF EEAEKISGEY IKQNYVKETH GCMLCPIQCT
QMTVVTTGPY KVAGERIKYE YESTWALGGN LGLSNTEAVL KMEKLANELG MDTISLGNTL
GTFLELVKRG KIKYDIDWGD AGALIDLVYK TAYRDGIGDD LAEGDWRLAN KYGAPDAFVG
SRGQGFPAYD PRALKGFAIS YVTANRGGDH LEAYSPTWEV LGVPEKVDPL CETSECISKQ
VRLVIYAQHL MALADSVTFC KFDTLDKDGI FEQHLAELFN AAFGWDTTPQ EMLTIGERIF
NVERLFHVKE GKWVKDELPP KMREPIKTGP AKGHTASKMF DEGIKEFYKL RGWVDGKPTY
ETLKRLGLEE FQYLQ
|
|---|
| |