Gene Pars_2279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_2279 
Symbol 
ID5056276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp2040315 
End bp2041253 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content57% 
IMG OID640469831 
Productpyruvate ferredoxin oxidoreductase subunit gamma/delta 
Protein accessionYP_001154475 
Protein GI145592473 
COG category[C] Energy production and conversion 
COG ID[COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit
[COG1144] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, delta subunit 
TIGRFAM ID[TIGR02175] 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family
[TIGR02179] 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00253279 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.440233 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGAATCG AAACAGTCTG GGTAGGCCGC GGAGGCCAGG GCATTGTCAC AGCTACTTAT 
ATTATCGCAA ATGCGTCTAT TATAGACGGC TTTCACGCAA TAGCCAATCC CGAGTTCGGG
GCCGAGCGCA GGGGAGCGCC GGTCAAGGCC TTCCTAACAA TAAGCAAAGA GCCCATAGAA
GACCAAGAGC CGGTCAAAAC CCCCCACGTC GCGGTGGTAT TCGACGACAA GTTACTCGGC
GCTATGCAGT TCGTCATAGA CGCGGTGAAG CCGGGGGGCT ACGTCATATT GAACACCGGA
AAGAGCCCGC AAGATGCAGC GGCTCTTGTG GGAAGAGACG ACGTAAACAT AGTGGTGATC
GACGCCATAG CCATCGCCAG GAAGCACCTC AAGCTAGACG TCCCCAACGG GCCCCTAGCG
GGAGCATTCT CCAAGGTGAT GGGGTTCCCA AGCCTCCAGT CTATTAGAGA GGCCTTCGAG
ACGCAACTAG GCAAGGCCGT GGAGGAGAAC TTCGCCGCGG TCAAAGAGGC CTACGAAGTC
GCCGCAGTGA TACCAGCCAA GAAAGTAGAC GCCTCGGCCA AGCCCAAGGG CATAATCTCA
ACTACGTCGG CCTTCCTAAC TGGGCCCTAC GAAGTCGTGG GCTGGCGCGA GGTGAACAAA
GCCGGTGCGG TGTTCCCCGG ATCAAGCTTC CCCTACGCCA CGGGCGGCTG GCGTATAGAT
AAGCCGGTTA TAGACCACTC CAAGTGCATC ATGTGCAGGA AGTGCTGGCT CTACTGCCCC
GACGACGCGA TCATAGAGGC TTGGGTGGAG AGGGAGGGGC CGAGGGGTAG GAAGTTCCGC
ATGAAGATGA TAGACTTCGA CTACCAGTAC TGTAAGGGTT GTGGCGTCTG CGCAGAAGTT
TGTCCAACTG GGGCAATACA AATGGTGAGG GAGATATGA
 
Protein sequence
MRIETVWVGR GGQGIVTATY IIANASIIDG FHAIANPEFG AERRGAPVKA FLTISKEPIE 
DQEPVKTPHV AVVFDDKLLG AMQFVIDAVK PGGYVILNTG KSPQDAAALV GRDDVNIVVI
DAIAIARKHL KLDVPNGPLA GAFSKVMGFP SLQSIREAFE TQLGKAVEEN FAAVKEAYEV
AAVIPAKKVD ASAKPKGIIS TTSAFLTGPY EVVGWREVNK AGAVFPGSSF PYATGGWRID
KPVIDHSKCI MCRKCWLYCP DDAIIEAWVE REGPRGRKFR MKMIDFDYQY CKGCGVCAEV
CPTGAIQMVR EI