Gene Pars_2270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_2270 
Symbol 
ID5055141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp2033196 
End bp2034233 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content59% 
IMG OID640469822 
Productradical SAM domain-containing protein 
Protein accessionYP_001154466 
Protein GI145592464 
COG category[R] General function prediction only 
COG ID[COG2100] Predicted Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.158683 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCCGCC CCATCTACAA AATAGGCCCG GAGACCCCCC TCGTCGGTGC GTTGGCCTTC 
GGCATAGTGG ATCGGGGGAC AAACGTCGTC GAGGTTAGGC CTACCAGCCT CTGTGCTCTG
AACTGCATCT TCTGCTCGGT CAATGCGGGG CCTGCATCTA GGGTACGCTG GGCGGAGTAC
GTGGTGGAGC CGGAGCCCCT AGTCGCCGCG CTTGAGGAGG TGGTGAAGTA CAAGGGGGTT
GACGACGCCG AGGTGCACAT AGACGGCATG GGGGACCCCG GCCATTATCC ACATCTCGCC
GAGCTGGTTA GGGGGGCTAA AACGATAAAG GGAGTCGCCG TTGTGTCAAT ACAGACCAGG
CTATATATGC TCGACGAGGA TAAGATAAGG GAGCTGGCCT CCGCCGGGCT TGACCGCCTC
AACGTAAGCA TTGACGCCTT GGATCCCTCC CTCGCTAAGA GACTCGCCGG AGCCGAGTGG
TACGACGTGG AGAGGGTCCT GGATCTAGTA AAGAGGGCGC TTGAGGCTGG GGTAAACGTG
GTCATCAGCC CGGTGTGGGT ACCTGGCTGG AATGACGGGG AGCTCCCTAA AATTGTAAAG
TGGGCTTACG ACAACGGAGT GGGGAGGGGC GTCCTCACTC CCGTGTTGAT TCAGAAGTAC
ATCCCACACA AAAGGGGTAG GAGGGTGAAG ACTAAGCCGA TGGAATGGGG GGAGTTCTGG
AAGAGACTGA GGGCAATGGA GAAGGAGCTT GGGGTTAGGC TGGTGCCCGG GAGGGGCGAG
TATAATATTC ACAAAGCACC CGAGTTGCCT AAGCCGCACG CCGTGGGAGA AGTGGTGGCC
GTGGAGATAG TGGGCAGAGG CGTCTTCAGG GGGGAGATGC TGGCAACTCC CCTGAAAAGG
AGGGGGACTG CCGTGTGGGA TCGGGTATTG ACAGTCGCAT ATGGCAAGGC GGCGTCGGAC
GAACTAGTTG GGAGCAGGGC AAGGGTAAGG GTGATTGAGA ACAGACATAA CATATACATT
GCGAAGCCCA TAGGCTGA
 
Protein sequence
MARPIYKIGP ETPLVGALAF GIVDRGTNVV EVRPTSLCAL NCIFCSVNAG PASRVRWAEY 
VVEPEPLVAA LEEVVKYKGV DDAEVHIDGM GDPGHYPHLA ELVRGAKTIK GVAVVSIQTR
LYMLDEDKIR ELASAGLDRL NVSIDALDPS LAKRLAGAEW YDVERVLDLV KRALEAGVNV
VISPVWVPGW NDGELPKIVK WAYDNGVGRG VLTPVLIQKY IPHKRGRRVK TKPMEWGEFW
KRLRAMEKEL GVRLVPGRGE YNIHKAPELP KPHAVGEVVA VEIVGRGVFR GEMLATPLKR
RGTAVWDRVL TVAYGKAASD ELVGSRARVR VIENRHNIYI AKPIG