| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_2267 |
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| Symbol | |
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| ID | 5055561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum arsenaticum DSM 13514 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009376 |
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| Strand | + |
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| Start bp | 2029063 |
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| End bp | 2030712 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640469819 |
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| Product | thiamine pyrophosphate binding domain-containing protein |
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| Protein accession | YP_001154463 |
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| Protein GI | 145592461 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.158148 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCGG CACAAGTCGC CGTATGGTGC CTTGAACAAC TAGGCGTCAA GAGGATCTAC
GGCCTAATCG GCACATCGAT CCTGGACTTC ATAGACGCCG TCAAGGACAG CAGGATAAGA
TACATCTCGA CACGCCACGA GCAGGTTGCA GTATCCATGG CAGACGCAGA GGGGAGGCTC
ACCGGCAAAC CCGGCGTAGC TGTTGTCCAC GCCGGTCCGG GGTTTTTAAA CTCGCTCATC
TCTGTGGCAA ACGCGTACAA GGACACCTCG CCTTTGTTGT TAATATCGGG GGCGGTCAAG
AGGCGGCTTG CGGGGCTTGA TTCCTGGCTC GAAGTGCCTC AGAGGGATAT TATAAGGCCT
ATTGTCAAGG CCGTTTTCCG AGTTGACAAG CCCCTCGATG TGGGTAAAAT TATCGCAGAG
GCGTACTCAA CAGCGGCCTC CCCGCCACAG GGACCTGTAT TTGTGGAAGT TCCAGAAGAC
GTGTGGTCCA TGTCCTCGGA GACTGCCCCT TGCAGGTTTA ATGTTAGACC TCCGCCAGTT
GTCTGCGACG AAGATTTGAA AAAAGTGGCG GAACTGCTTT CAAAAACAAG GAGGCCGGTT
TTGCTGGCTG GAGGGGGCAT AAACAACGAC GAAGGCGCCA GGCTACTTTT ACAACTCGCT
GAGTGGTGGC AAATACCAGT TGCCGTAACT GGAAACGGGC GGGGGGCATT TCCCGAGGAT
CACCCGCTGT TTCTAGGAAG GGCGGGCTTC GGCGGCGGCA ATCCAGTAGC CGACCAAGCA
CTTATAAGAG CCGATCTTGT CCTCGCAGTG GGTGCCGGGC TCTCCGACAC AACGACTTAC
GGGTATAACT ATGTGCCGAG GGGTGATATA ATTGTTGTCA ACCTAGACCC ATTAGCTGAG
AAGAAGCCTA TCCCCTACAC TCTCCGCTTC TACGCCGACG CTGTAGATTT CCTCAGAAAA
CTAGTAGCGG CTGGGATAGA TGTGAAAGTT GACCCGAATT GGCATAAAGA AATAGAAGAG
ATGAGGAAAA GCTGGAATAC GTACCTAGAA GAGGCGCTCT CTAGAAGCTA CCACGGCTTT
GTCAACCCGT CTAAGTTCTT CTACCACCTG GACAAGGCGT TGCCCCGAGA TATCGTGATG
GTGGGAGGAC AAGGCATGCA CATTGTGTAC ACCTTCAGCT TTGTAAAAAT TAGAGCAGTG
CGTGGTTACC TGGCGGCCTT TAACCTAGGC GCCATGGGAT TTGCCTTCCC CGCCGCGCTG
GGGGCAAAAC TCTCTATGCC TGAACGCGAT GTATATGCAG TTGTTGGAGA CGGCGAGTTT
ATGATGACCG TACAAGACCT AGAAACCGCG ACTAGGGAGA AAATCCCAGT GAAAATTATA
GTTGTAAACG ACAATTCGTA CAGGGTGCTA TATGCAAGGC AAAGGGCGCA GAAAATGGGC
AGAGTCTTCG GCACGCTACA CACAAATCCC GATTTCGTCA AGCTTGCAGA GGCGTTCGGC
GTTGAGGCCA TGTCTATAAG CTCCGACGAC GATATCCCCA AAGCCGTGAA GTTCATAACT
GAGCACTCTG AAAGACCTAA ACTCTTGGAA GTAAAAATCC ACCCCGACGA CTTCCCCCCA
ATGAATATAG AAGCCGCGTT AAAATTCTAG
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| Protein sequence | MNAAQVAVWC LEQLGVKRIY GLIGTSILDF IDAVKDSRIR YISTRHEQVA VSMADAEGRL
TGKPGVAVVH AGPGFLNSLI SVANAYKDTS PLLLISGAVK RRLAGLDSWL EVPQRDIIRP
IVKAVFRVDK PLDVGKIIAE AYSTAASPPQ GPVFVEVPED VWSMSSETAP CRFNVRPPPV
VCDEDLKKVA ELLSKTRRPV LLAGGGINND EGARLLLQLA EWWQIPVAVT GNGRGAFPED
HPLFLGRAGF GGGNPVADQA LIRADLVLAV GAGLSDTTTY GYNYVPRGDI IVVNLDPLAE
KKPIPYTLRF YADAVDFLRK LVAAGIDVKV DPNWHKEIEE MRKSWNTYLE EALSRSYHGF
VNPSKFFYHL DKALPRDIVM VGGQGMHIVY TFSFVKIRAV RGYLAAFNLG AMGFAFPAAL
GAKLSMPERD VYAVVGDGEF MMTVQDLETA TREKIPVKII VVNDNSYRVL YARQRAQKMG
RVFGTLHTNP DFVKLAEAFG VEAMSISSDD DIPKAVKFIT EHSERPKLLE VKIHPDDFPP
MNIEAALKF
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