| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_2251 |
|---|
| Symbol | |
|---|
| ID | 5054609 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | - |
|---|
| Start bp | 2017598 |
|---|
| End bp | 2018371 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640469804 |
|---|
| Product | uroporphyrin-III C-methyltransferase |
|---|
| Protein accession | YP_001154449 |
|---|
| Protein GI | 145592447 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0007] Uroporphyrinogen-III methylase |
|---|
| TIGRFAM ID | [TIGR01469] uroporphyrin-III C-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00937998 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.18595 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCATTGT TTTTAAACAG TGTGGAGGAG GTGGATGTGG GCGTTGTGTA TATCGTGGGG
GCTGGACCCG GCGATCCTGA ACTTATAACT GTGAAAGGGT TAAGGCTAAT AGAAAGGGCC
GACGTGATTC TCCACGACCG CCTTGTTTCG AGGGAGCTTC TAAGATTTGC CAAGCCTGGC
GCCTTGATTG TAGACGTGGG GAAGAGCCCA GGCGGGGCCG GGCCAACACA GGAGGAGATT
AACCACATGC TTCTCTCATA TGCGGCTAAG TACGACGTCG TTGTGAGGCT CCACGGCGGC
GACCCCCTCG TCTTTGGGCG TGGGTTTGAG GAGTGTCTAT ACCTAGCAGA AAGGGGGGTT
CCATGCGAGA TCGTGCCGGG GGTGACCAGC GGATTGGCGG CCCCAGCCAA GTATTACATA
CCCCCAGTCC TTAGGGGAGT GGCCAGCTCT GTCGCGTTGG TCACGGGTCG GGAGGATCCC
GCAAAGGGTG TCCGCCAGGT GGATTTCAAG AAGCTCGCCG CCGCGGTAGA TACGATAATA
ATATACATGG GGGCATCGGC GGCTGGTGAC ATAGCCAATG ACCTACTCGC CGGGGGCCTT
CCTGCAGACA CGCCAGTGGC AGTTATAAAG TCGGCGTTTT TCCCAGATGA GGAGTTTAAA
GTGTTCAGGC TCGGCGATCT CGGCCCCGTG CCTAACCCCA GCATTATCGT AGTAGGCAGA
GTCGTGGAAA GGGGGCTACA CCTACGGCGG CTAAGGGACG GAACGCCATC TTGA
|
|---|
| Protein sequence | MPLFLNSVEE VDVGVVYIVG AGPGDPELIT VKGLRLIERA DVILHDRLVS RELLRFAKPG
ALIVDVGKSP GGAGPTQEEI NHMLLSYAAK YDVVVRLHGG DPLVFGRGFE ECLYLAERGV
PCEIVPGVTS GLAAPAKYYI PPVLRGVASS VALVTGREDP AKGVRQVDFK KLAAAVDTII
IYMGASAAGD IANDLLAGGL PADTPVAVIK SAFFPDEEFK VFRLGDLGPV PNPSIIVVGR
VVERGLHLRR LRDGTPS
|
|---|
| |