| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_2246 |
|---|
| Symbol | |
|---|
| ID | 5055348 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | - |
|---|
| Start bp | 2013097 |
|---|
| End bp | 2014068 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640469799 |
|---|
| Product | AsnC family transcriptional regulator |
|---|
| Protein accession | YP_001154444 |
|---|
| Protein GI | 145592442 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1522] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.667214 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.373627 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACACGA AGACGGTGGA TCTCCTCATG GAGGTGCAGT ACAACTTCCC CCTTGTCGAG
AGACCCTTCC TTGCCGTCGC CGAGAGGATA GGCGCCAGCG AGGAGTGGGT GATAAGTAAG
CTGAGGGAGG CCGTTACATG GGGCGTTTTG AAAAGGATAG GGGCAATCCT AAACTACAGA
AGCCGAGGTC TCACGGCGGC GCTGGTGGGC ATGGCGGTTC CCGAGGACGT AATAGAAGAG
GTCGCCGCCG AGGTGAACAG AGACCCCTAC GTCAGCCACA ACTTCCAGCG GGACTACAAG
CCGTACAACC TGTGGTTCGT AACGAAGGCC CAGACGAAGG AGGAGCTGGA GGCCAAGATA
GCCGCCGTCG CGAAGAAGTA CGGGCTAGAT TACATCATTC TGTATTCGCT TAGGAGCTAC
AAGGTGGACG TCCGCTTCGA TCTCAGAAAG GGCATTTCCT GGACCAAAGG CTACATAATG
CCGGAGAACC CCCCAAGCGT CTCCGAGGCG GGCGTCCCAA TGGCGTTTTT CGGCAAGATA
AAATCCCTGC CCTTGACCCC CGAGCCTTTT AAAGAGGCGG CGCAGGTCCT AGGCGTGTCG
GTGCAGGAGG CCTTGCAGAA GATAAGGCAG CTCATAGAGC TGGGCATACT CCGCGACCTC
CACGCCACTT TAGACGGAGA GAAAGCCGGT TTTAGGGAAA ACGCCATGGT GGTGATGAGA
GACGCCAAGT GCGAGGAAAT AGCGGGGTTG CCCATCTCCA CTCACGTCGT CCTCCGCAAC
ACAGTGCCTG GGAAGTGGGA ATACCCGTGT TACTTTATGG TGCACGGCGT GTCAAGACAA
GTCATTGAGG ACTACGTCGG GGAGGCGTTG AGGAAGCTTG GCGTGAGGGA GTATAAGTTA
CTCTACAGCG TCAGGGACTT CCTAGGCGGG AGGGAAATGG CACGGCGCGT AGAGAAGGTG
GCTGAGGACT AA
|
|---|
| Protein sequence | MDTKTVDLLM EVQYNFPLVE RPFLAVAERI GASEEWVISK LREAVTWGVL KRIGAILNYR
SRGLTAALVG MAVPEDVIEE VAAEVNRDPY VSHNFQRDYK PYNLWFVTKA QTKEELEAKI
AAVAKKYGLD YIILYSLRSY KVDVRFDLRK GISWTKGYIM PENPPSVSEA GVPMAFFGKI
KSLPLTPEPF KEAAQVLGVS VQEALQKIRQ LIELGILRDL HATLDGEKAG FRENAMVVMR
DAKCEEIAGL PISTHVVLRN TVPGKWEYPC YFMVHGVSRQ VIEDYVGEAL RKLGVREYKL
LYSVRDFLGG REMARRVEKV AED
|
|---|
| |