Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_2245 |
Symbol | hemC |
ID | 5055557 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | + |
Start bp | 2012207 |
End bp | 2013100 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640469798 |
Product | porphobilinogen deaminase |
Protein accession | YP_001154443 |
Protein GI | 145592441 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0181] Porphobilinogen deaminase |
TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.53648 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.202815 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGACTAG TAGTGGCAAC TAGGGGGAGC AAGCTGAGCA TGCTCCAAAC AGAGGAGTTG CTCGCGCAGA TAAAGGCCGT TGAGCCTAGC ATTGAGTTCG AGATAAAGAT CGTGAAGACG ACTGGAGATG AGGTACAAGA CAAGCCGCTT TATCAGATAG GGGTAAAGGG CATTTTCGAG AAGGAGGTAA ACCTGGCGGT GCTGAGGGGC GAGGCGGATG TCGCTGTGCA TTCGCTTAAG GATCTCCCGT CGGAGCTTTC GCCGGGGCTT GTCCTCGCCG GGTTTTCTAA AAGGGCGCCG CCCTTCGATG CGGTAGTAAG CACGGCTGGG TACGTCCTCG AAACGTTGCC CCGGGGCGCT TTGGTCGGCA CCTCCAGCGT TAGGAGAGCT GAGTTCGTGA AGGCTATCAG GCCCGATGTG AGGGTTGAGC CGCTGAGGGG GAACGTCGAT ACTAGGATCA ACAAAATACT CCAGGGTAAG TACGATGCTG CTATTATGGC AGTCGCCGGC ATATATAGGC TATACGGAGC CTCGCCCCCC ATAAAGCTGG CAGTCTTGAG GCCTGAGGTC TTGCCCCCAC CGCCAGGCCA GGGCATCGTC GCGGCCGTTG TGAGGGAGGC CGATAGTTGG TTAATTGATT TGTTAAAGAA GGCGAGCGAC CCCAAAGCCT CGTTGGAAGC AATTGCTGAG AGGGAATTCC TCAAGGCCGT GGGCGCCGGT TGTCATGTGG CTATCGGAGG CGTGGCATTC GCTAGAAATG ACACTGTGGA ATTCATAGCG GGATACGCCT CCGGCGGCAG GAAGTACATA GTCAGGGTTG TAGGCGACGA CCCTGTTGAG GTGGGGCGGA GGGCCGCGGA GGAAATCCGT AAGTTTAAAG ACGGAGACGT TTAG
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Protein sequence | MRLVVATRGS KLSMLQTEEL LAQIKAVEPS IEFEIKIVKT TGDEVQDKPL YQIGVKGIFE KEVNLAVLRG EADVAVHSLK DLPSELSPGL VLAGFSKRAP PFDAVVSTAG YVLETLPRGA LVGTSSVRRA EFVKAIRPDV RVEPLRGNVD TRINKILQGK YDAAIMAVAG IYRLYGASPP IKLAVLRPEV LPPPPGQGIV AAVVREADSW LIDLLKKASD PKASLEAIAE REFLKAVGAG CHVAIGGVAF ARNDTVEFIA GYASGGRKYI VRVVGDDPVE VGRRAAEEIR KFKDGDV
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