Gene Pars_2241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_2241 
Symbol 
ID5054667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp2008791 
End bp2009447 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content58% 
IMG OID640469794 
Producthypothetical protein 
Protein accessionYP_001154439 
Protein GI145592437 
COG category[S] Function unknown 
COG ID[COG1738] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00697] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.331157 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATGGC TCTACGGCCT CGTCCTCTAT TCCGTCTATC TTTTTCTACT ATGGCTCTGG 
CGAGAGAGAG TAGAGACCGT CCTTGTAGGT CTTTTCTTCG GTACCTTGAC AGCGGCGCAG
TTCATCGCCA ACAAGCTAGT CGACTACGGT GTCGGCGTGG CTCCGGCAGG CACCGTGATC
TTTATGACTA ACGTCGCAGT CCTCGACGCC ATGGCTGTCT TCTACGGGAG GCAGTTCGCC
ATAAGGGCCG TCAGGCTTGG ATTCTTCTTC CAAGCGGCAG TTGCCTTCGC GGCATGGTCG
GCGTCTCAAC TACCGCCACC CGCATGGTTT GCCGAGAGGG CGGCCGTAGT GGACAGCGTC
ATAGCCCCCT CGGCGAGGAT CGCAATAGCC TCCCTAACGG CGTACCTTGC CTCCTCCACT
ATAGACGTCT ACATAGTGAC TAGGTGGCCG AGGCTCCACA TACTCGCCAG GGTGTACAGC
TCCTCCCTAG TAGCCCAAGT CGTCGACACG GCACTCTTTA TCACGCTGGC CTTCGGCCCC
AGCGCCGAGG TTATCCTAGG CCAGATAATC GTTAAGTGGT TGCAAATACC GCTGGAGGCC
TTGTTAGTAT ACGGCGCGAG ACGCTACGTG GGGGCTATCC GGGCGCCGAC AGCCTGA
 
Protein sequence
MAWLYGLVLY SVYLFLLWLW RERVETVLVG LFFGTLTAAQ FIANKLVDYG VGVAPAGTVI 
FMTNVAVLDA MAVFYGRQFA IRAVRLGFFF QAAVAFAAWS ASQLPPPAWF AERAAVVDSV
IAPSARIAIA SLTAYLASST IDVYIVTRWP RLHILARVYS SSLVAQVVDT ALFITLAFGP
SAEVILGQII VKWLQIPLEA LLVYGARRYV GAIRAPTA