Gene Pars_2235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_2235 
Symbol 
ID5056305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp2003060 
End bp2003623 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content53% 
IMG OID640469788 
Producthypothetical protein 
Protein accessionYP_001154433 
Protein GI145592431 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.569395 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAAGCA GGGAGGTGGC TTATTTACAG ATGCTCGCCT TGCTCAGCCT ATCAAAAACG 
CCAAGAGGCA GGAAAAACTT AGCCGAAGAG TTGAGGATAG GCGAAGGCAT TGTGAGGACG
TTGCTGGAAG GCGCACGTGA TCTGGGCCAC GTAGCCGTAA TGAGGGGCGG GGTGGTGGCT
ACTGAGCAGG GATTCTCCTT TCTAAAAGAG GCGCTAAATC TCTGCGGCGT CGCCGAGATA
TTCGCTGTTG AGGAGGCGAA GAGGCTGTTA TGCGGAAGGC GTTGCATGGC CTACGTTTTG
CAAGAGGAAG TAAAAGACCC GTTGAAGACA AGAGACTCGC TGGTGCGGCT CGGAGCATGC
GGCGCATTGA TACTAGAAAA GAGAGGAGAC CGGTTTTTCC TCCCTCCGCT GGGGGAGAGC
CTAGAATCGT ACGACACAGC CCTTGCAAGT TTACTTAAGG CAAAGGTGGC GGGGGACTTT
TCTGTAATTA TCTCGTGCGG CGAAAATTAC GCCGACGCCT TCGCTTACAT AGCTCTGAAG
TGCCCCCAGA AGCTAAGCTT ATAA
 
Protein sequence
MKSREVAYLQ MLALLSLSKT PRGRKNLAEE LRIGEGIVRT LLEGARDLGH VAVMRGGVVA 
TEQGFSFLKE ALNLCGVAEI FAVEEAKRLL CGRRCMAYVL QEEVKDPLKT RDSLVRLGAC
GALILEKRGD RFFLPPLGES LESYDTALAS LLKAKVAGDF SVIISCGENY ADAFAYIALK
CPQKLSL