| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_2226 |
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| Symbol | rpl10e |
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| ID | 5055807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum arsenaticum DSM 13514 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009376 |
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| Strand | - |
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| Start bp | 1994794 |
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| End bp | 1995342 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640469779 |
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| Product | 50S ribosomal protein L10e |
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| Protein accession | YP_001154424 |
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| Protein GI | 145592422 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0197] Ribosomal protein L16/L10E |
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| TIGRFAM ID | [TIGR00279] ribosomal protein L10.e |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCAGTAA GGCCGGCGAG GTGCTACAGG AGGATTAAGG GGCCCCCTTA CACTAGGGAG
GAGTACATAC ACGGAGCGCC GATGATCCAG ATACCTAAGT TCGACATGGG CACCACAAGC
GCCGCGGCGA GGGCCACCTT CCCCATGGTA GCCAAGCTCA TCGTAGAGGA GCGAGGCCAA
ATAAGAATGC AGGCCTTAGA GGCGGCTAGA CAGATGGCGT CTAAGTACCT CACCAAATAC
GTCGGAGACG CAAACTACTA CCTCAGACTC AACGTAATCC CCCACCACGT GTTGCGCGAA
AACAGAATGC TTGCCATGGC GGGCGCAGAC CGTCTCCAAG AGGGGATGAG GCTGGCCTTC
GGCTCCCCGG CTGGCAGAGC CGCCAGAGTG GAGCCGGGCC AGATACTCTT CTACGCCGAG
TTCAAGCCAG AGCACCTTGC CCACATAAAA GAGGCGTTTA GGCGAGCCGC GTCAAAACTA
CCGTTGCCCA CGAGAATCGT GATAGAGCCA AAGGGCGATG GAGACGGCAA AACAGCTACA
CAAGGATAG
|
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| Protein sequence | MPVRPARCYR RIKGPPYTRE EYIHGAPMIQ IPKFDMGTTS AAARATFPMV AKLIVEERGQ
IRMQALEAAR QMASKYLTKY VGDANYYLRL NVIPHHVLRE NRMLAMAGAD RLQEGMRLAF
GSPAGRAARV EPGQILFYAE FKPEHLAHIK EAFRRAASKL PLPTRIVIEP KGDGDGKTAT
QG
|
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