Gene Pars_2225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_2225 
Symbol 
ID5055806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1994085 
End bp1994825 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content51% 
IMG OID640469778 
Producthypothetical protein 
Protein accessionYP_001154423 
Protein GI145592421 
COG category[S] Function unknown 
COG ID[COG4879] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGACGG CAAAACAGCT ACACAAGGAT AGGATCGAAG CCGCCCTCAT CCTCCTAGAG 
AGGGTTCTCA ACGGGTTCAT AACCTCCCGC TCCGCCCTAG TGGCTGAGTT GCAGGAGATA
TACAAATCAA AAAGGATAGA GCCTTTCCGC GGCCTTTCCA AAGAAGGAGT CTACGACAAG
GAGGTCGCAA CGGTCTACCT TGTCGGCGTT TACGGAACTG GGATATTAGC CCCAGGAGAC
TTCGACAATG TTTTCTACAT AGAAAACAGA AGCCTAGAGG CCGTCGAGAT TATCCGCAAC
GTAGGCGAAG TTGTCACCCA GGAAACAGCG GAGTCCCTAA GGCGGAAGAC GGACGAGATA
AAAGGCAAGT CAGAAGAAGA CAAGGTTTTC AGAGTGCTAA GGCTGGTCTT TACAGGGACA
ATACTCGGCT ACTACCCAGA GATGCTCCTA GTAAAGGCGA TCAAGACATA CGAAGTAGTC
TACCCAAGCC TCGCCGAGCG GCTCGTGAAC TACGCCGCGT TCTACAGCGC GTATAAAATA
GCAGAGGAGA TAGCGCTGGG GAAAATAAGG AGCGCCGACA GTTTAAAAAT CCTGAAATAC
ACCTACTGCC TCAAGATGGG CTTCCAGCAG TGCAAACCCA GCGACCGCCT AATAGCGGAG
GTCGCCCACC ACATATACAA AGTCGACAAA TCAACACTCT CGAAGCTATT CGCAAAGGGC
GCCCTGCCTA AACTAGGCTA G
 
Protein sequence
METAKQLHKD RIEAALILLE RVLNGFITSR SALVAELQEI YKSKRIEPFR GLSKEGVYDK 
EVATVYLVGV YGTGILAPGD FDNVFYIENR SLEAVEIIRN VGEVVTQETA ESLRRKTDEI
KGKSEEDKVF RVLRLVFTGT ILGYYPEMLL VKAIKTYEVV YPSLAERLVN YAAFYSAYKI
AEEIALGKIR SADSLKILKY TYCLKMGFQQ CKPSDRLIAE VAHHIYKVDK STLSKLFAKG
ALPKLG