Gene Pars_2223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_2223 
Symbol 
ID5056280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1992596 
End bp1993417 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content56% 
IMG OID640469776 
Producthypothetical protein 
Protein accessionYP_001154421 
Protein GI145592419 
COG category[R] General function prediction only 
COG ID[COG1938] Archaeal enzymes of ATP-grasp superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.37331 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCTCG AAGTAAAGAT CAGCGGACTG CCGCGGGACA AAAAGAACAT CCTCGTGATG 
GCTTGCCCCG AGCCCTCGCT GGCAGGTGTC ATAGCAGTTG AGTATCTAAT AGATGCGCTT
AAGATGGAGG AGATAGGGGC AATTAAAATC ACGGAGATGC CTCCAGTAAT CGCCGTCGTC
AACGGCGCGG CGAAACTGCC TCACAGACTG TTCTACTCGA AAGAGGCGGG CATCCTTGCC
ATTAGGCAAC ACGTTCCCAT ACCGCCGCAG ATCTACGCTG AGTTCATCCA CAAGGTCCTA
GATTGGGCCG AGGAAAACAA GGTAAAACTC GTGGTCTGCC TATCGGCCAT GCCAGCTGCC
GGCGAGAAGG AAAGTGAAAA CGTCTACTTC GTCACGGAGG AGGGCCTAGT GGAGAAGTTT
AAGCAGTACG GCTTCGAGCC TATAAAAGAG GCCACCGTGA CCGGACTCGA GGGGGCATAC
CTAGACGCAG TGCTCGGCAG GAGCATAGAC GGCGCACTCA TAATCGCCGA GTCTAAGCTA
CTCACCGCCA TAAAGAGGCT GGTAGACAGC GGCAAAATCG CCACCCACCG CGACGTGATG
CTTATACTCA ACGACCTTGT CGGGCGGGTC GGCCCTGACG TAGGCGCCGC GTTGAAGCTA
ATAAACGCTG TGGCTAAGCT CGCAGATATC CAAATAGACA CGGCAAAGTT GCAAGAGCAC
GCAACTAGGT ATGCCTTCCT CATCGAGAAG AACATAGAGG CCATCTTAAA GCCGGCGGAG
GCCATGGCGC CGGCGAGGCG CGAGGTGCCG CTGGTGTTCT AA
 
Protein sequence
MRLEVKISGL PRDKKNILVM ACPEPSLAGV IAVEYLIDAL KMEEIGAIKI TEMPPVIAVV 
NGAAKLPHRL FYSKEAGILA IRQHVPIPPQ IYAEFIHKVL DWAEENKVKL VVCLSAMPAA
GEKESENVYF VTEEGLVEKF KQYGFEPIKE ATVTGLEGAY LDAVLGRSID GALIIAESKL
LTAIKRLVDS GKIATHRDVM LILNDLVGRV GPDVGAALKL INAVAKLADI QIDTAKLQEH
ATRYAFLIEK NIEAILKPAE AMAPARREVP LVF