Gene Pars_2209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_2209 
Symbol 
ID5054821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1981068 
End bp1981853 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content56% 
IMG OID640469761 
Producthypothetical protein 
Protein accessionYP_001154407 
Protein GI145592405 
COG category[S] Function unknown 
COG ID[COG1912] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.171783 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.703654 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCATCG CCTTGTTGAC CGATTTCGGG ACTAAGGACT ACTTCGTGGC CGCTATGAAG 
GGCGTAATAC TGTCGATTAA CCCGAAAGCG GCCGTAGTCG ATATCACTCA CGAAATCCCG
CCACAAGACG TATGGACTGG AGCCTTCGTG CTGAAATCCG CGTATAAGTG GTTCCCCCGT
GGCACAATTT TTTTGGCTGT GGTGGACCCC GGCGTGGGCA CGGAGAGGGC TCCCCTCATT
ATTAAAACGA GGCGCTACTT CTTCGTAGGC CCCGACAACG GTTTGCTCTC CCTCGCCGCT
GAGGAAGACG GCGTAGAGGA GTTATACAGA ATAACCGCGT CGCTTCCCCA AACCTCGTCG
ACATTCCACG GCCGGGACGT CTTTGCCCCA GCGGCTGCGT ACCTCTCGCT GGGCGTAGAG
CCGCCGATGC TAGGCATCCC CACCAGCCAG TGGACGAAGT TAACAATGCC CAAGCCGCGC
CTAGAAAACG GCGTTCTCTA CGTAAACGTG ATTTACATAG ACAGGTTCGG CAACGCCTAT
ACGTCAGCCG GAGCTGAGAT ATACCAAATC GCCTCTGTAG GCGACAAGCT CTGTGTAGAG
ACGCCGGCGG GGGAGGTGTC GGCGACTTTC GTCAAGTCTT ACGGATATGC ACAGCCAGGA
GAGGCGGTCA TGTTGGTAAA CAGCGAGGGC TATCTAGAAC TGGCAATCTC CATGGGCAAC
GCCGCGGCGA AATACGGCCT CAAACCGGGC CAAGAGCTAA AAATCCGCAT ATGTCAACAG
AAGTGA
 
Protein sequence
MVIALLTDFG TKDYFVAAMK GVILSINPKA AVVDITHEIP PQDVWTGAFV LKSAYKWFPR 
GTIFLAVVDP GVGTERAPLI IKTRRYFFVG PDNGLLSLAA EEDGVEELYR ITASLPQTSS
TFHGRDVFAP AAAYLSLGVE PPMLGIPTSQ WTKLTMPKPR LENGVLYVNV IYIDRFGNAY
TSAGAEIYQI ASVGDKLCVE TPAGEVSATF VKSYGYAQPG EAVMLVNSEG YLELAISMGN
AAAKYGLKPG QELKIRICQQ K