Gene Pars_2186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_2186 
Symbol 
ID5056051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1958464 
End bp1959102 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content61% 
IMG OID640469738 
ProductTenA family transcription regulator 
Protein accessionYP_001154384 
Protein GI145592382 
COG category[K] Transcription 
COG ID[COG0819] Putative transcription activator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACGG AGGAGTTGAG GAGGCGTGTC GATCAGATTT GGCAGAGGAT TTTCGCCCAC 
CCCTTCGTGG TTGAGCTCTA CGCCGGGAGC CTCCCCATGG AGAAGTTTAA GTACTACCTG
CTACAGGACT ACAACTACTT GGTGAACTTT GCCAAGGCCT TGTCCCTGGC GGCGGCGCGG
GCCCCCGGGG TGGATCTCAT GAAGACGGCG CTGGAGCTGG CTTACGGCAC GGTGACGGGG
GAGATGGCGA ACTACGAGGC GTTGCTGAGG GAGGTGGGGC TGACGCTCAA GGACGCCGAG
GCCGCTGAGC CTAACCGGGT AAACGTGTCG TACATGGCGT ATCTCAAGTC GGTCTGTGCG
CTTGAGGGCT TCTACCACTG CATGGCGGCC CTCCTCCCCT GCTTCTGGTC CTATATGGAA
ATAGCCGAGG TGCACCGGGA GAAGCTCGCC GCCAACCCCG TGGCGGTTTA CAGGAAGTGG
GCCTCTGTCT ACTTGAGCCA GGAGTACCGG GCACTGGTCT CAAAGCTGAG GGGGGTGCTA
GACGCGTCTG GCCTTTCGGC AGAGGGGCTG TGGCCATACT TCAAGGAGGC GTCAATGTAC
GAGCTGGAGT TCTGGCAGGC GGCGTATGAG GGTCATTGA
 
Protein sequence
MATEELRRRV DQIWQRIFAH PFVVELYAGS LPMEKFKYYL LQDYNYLVNF AKALSLAAAR 
APGVDLMKTA LELAYGTVTG EMANYEALLR EVGLTLKDAE AAEPNRVNVS YMAYLKSVCA
LEGFYHCMAA LLPCFWSYME IAEVHREKLA ANPVAVYRKW ASVYLSQEYR ALVSKLRGVL
DASGLSAEGL WPYFKEASMY ELEFWQAAYE GH