Gene Pars_2174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_2174 
Symbol 
ID5055260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1944073 
End bp1944561 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content58% 
IMG OID640469726 
Productphosphoribosylaminoimidazole carboxylase, catalytic subunit 
Protein accessionYP_001154372 
Protein GI145592370 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 
TIGRFAM ID[TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTTG CAGTCATAAT GGGGTCCATA AACGACTTAG ATGTCATGAC AGAGGCTTTG 
GAGGTGCTGG AGGCGCTGGG CATCCCCTAC GAGGCGCGGG TTGTCAGCGC CCACAGGACG
CCCGACTACA TGTACCAGTT CGCCCAGGAG GCCGAAAGGG AGTTCGACGT AATCATCGCG
GGGGCAGGCG GCGCGGCCCA CCTACCCGGC ATGACGGCGT CGCTAACGCC GTTACCAGTA
ATCGGCGTGC CTATACCCAC AAGGCACCTC GGAGGGCTCG ACTCTCTCCT CTCCATTGTA
CAGATGCCAA GGGGAACCCC CGTCGCTACG GTGGCCATCG GCAACGCCGC CAACGCCGCC
TACCTCGCCG CGAGGATCCT CGGCGTGAAG CACCCCCACA TCCGGGAGAA AGTACGCGAA
CACATGAAAA AGATGCGTGA AGAAGTTCTG ACCAAGTCCT TCATAAAGTC TTTTTCAATA
AACACTTAA
 
Protein sequence
MKVAVIMGSI NDLDVMTEAL EVLEALGIPY EARVVSAHRT PDYMYQFAQE AEREFDVIIA 
GAGGAAHLPG MTASLTPLPV IGVPIPTRHL GGLDSLLSIV QMPRGTPVAT VAIGNAANAA
YLAARILGVK HPHIREKVRE HMKKMREEVL TKSFIKSFSI NT