| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_2155 |
|---|
| Symbol | |
|---|
| ID | 5054345 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | - |
|---|
| Start bp | 1931294 |
|---|
| End bp | 1931878 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640469707 |
|---|
| Product | putative transcriptional regulator |
|---|
| Protein accession | YP_001154353 |
|---|
| Protein GI | 145592351 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.157005 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGATGTTA GAGAAGAGAT TTTGAAGCTA CTGAAGCAGA GGGGGGATCT TACTACTACA
GAAATTGCTG AGTTGCTGAG ACTACCGCGA CACAAAGTTC TCAAGACGCT AAACCGCCTC
TATTTTGAGG GAGTGGTGGA GCCGTACAAG AAAAACAGGA AGTACTACTG GCGCCTTTCT
TCAGGATACG TCGCAGTTGC CCCCCTCCAC TTCTCCATTG ACCCGGTGTT GTATATAGAG
GGTGTAATAG AGCCGATATA TAGGAAAGTA CAAGACAGAG TAGACACGTT CATATTTACC
CATGTGAAGA ACAAGGAGTA CTGGCTATGT GAGTGCGACA CAGGCTTCTT AATACTTACC
GATCAGCCGA TAGAGGGGTG CAGTTGTAAG TTAAGGCACG CCTTTGGCGA GAGAAAACTT
GCAATGATAT ACCTCCCTAA GGAGTTGAGA TTTAGGTTTT GGAAAAGCTA CAGATACTCA
GAGGGGGATG TGGAATTCGT AATCCTTATG CCCGACGAGC GCGACTCTCC CGAGTTGCAA
CAAAAATACC TCCAATACGC AGGTGAGGCT ACTTCATCCA TTTAA
|
|---|
| Protein sequence | MDVREEILKL LKQRGDLTTT EIAELLRLPR HKVLKTLNRL YFEGVVEPYK KNRKYYWRLS
SGYVAVAPLH FSIDPVLYIE GVIEPIYRKV QDRVDTFIFT HVKNKEYWLC ECDTGFLILT
DQPIEGCSCK LRHAFGERKL AMIYLPKELR FRFWKSYRYS EGDVEFVILM PDERDSPELQ
QKYLQYAGEA TSSI
|
|---|
| |