Gene Pars_2152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_2152 
Symbol 
ID5054962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1928050 
End bp1928958 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content56% 
IMG OID640469704 
ProductABC transporter related 
Protein accessionYP_001154350 
Protein GI145592348 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.191779 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTATTTTA TAAGCGTGAT TGTCTGTGAG GGACTCGGTA GGCGTTACGG GGATTATTGG 
GCGTTGAGAT ATGTGTCTTT TGAAGTGGGC AGAGGCGTGG TGCTCGGCGT GCTGGGGCCC
AACGGGGCAG GTAAAACCAC CATGGTCAGG ATCTTGACGA CGGAGCTCAT GCCCTCCGAG
GGCAAGGCGT TTGTAGCCGG CTTCGACGTT ATAAAGGAGG CTGAAAAAGT GAGGAGAGCG
GTGGCGGCGG TGCCTCAGGA GAGCAGACCT ATAGACTTCC TGACGCCGTA CGAGTTCGTG
CTCAGCTACC TCCTCCTACG CGGCTACTCG CTGAGAGAGG CCAGAAGGAA GACCGCGGAG
GCATTGAAGG AATTTGGCCT ATGGGAAACA AGGAATAAAG AAGTCGATGC GCTGTCAGGT
GGGATGAAGA GGAGGGTACT CGTCGCCGCC GTCTTTGCCT CAGACGCCGA CGTCGTTTTC
CTCGATGAAC CTACCACAGG TCTAGACGTC TATTCCAGAA GGCTAGTTTG GAACGCCGTG
TCGGAGCTGA AGAGAAGGGG CTCAACAGTT GTCCTCACAA CGCATTACGT AGAGGAGGCC
GCGGCGCTGA GCGACGTAGT CCTCGTCATA AACAAGGGCC GCGTAGTGGA TCTCGCCCCG
CCCGATAGGC TCGTGGAGAA GGTGCCCGGG AAGTACGTAG TCGAGGTTTA CGGCAAAGAC
GGCTTAGCGG TAGAGGGGGG CGCGGTATTG AAAATAGGCG ACCGGCTCCT CTATTATGTC
GACGCGCCGC CCAAACTGGG AGAGCCTTCA AAAGACGGGG CCAAGATCGT AATTAGGCCC
AAATCGCTGG AGGACTTTGT CTTGTTCAAC ATAGGCCTCA TAGAGGAGGA GAGCCATGAA
GACGATTAA
 
Protein sequence
MYFISVIVCE GLGRRYGDYW ALRYVSFEVG RGVVLGVLGP NGAGKTTMVR ILTTELMPSE 
GKAFVAGFDV IKEAEKVRRA VAAVPQESRP IDFLTPYEFV LSYLLLRGYS LREARRKTAE
ALKEFGLWET RNKEVDALSG GMKRRVLVAA VFASDADVVF LDEPTTGLDV YSRRLVWNAV
SELKRRGSTV VLTTHYVEEA AALSDVVLVI NKGRVVDLAP PDRLVEKVPG KYVVEVYGKD
GLAVEGGAVL KIGDRLLYYV DAPPKLGEPS KDGAKIVIRP KSLEDFVLFN IGLIEEESHE
DD