| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_2151 |
|---|
| Symbol | |
|---|
| ID | 5054594 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | - |
|---|
| Start bp | 1927338 |
|---|
| End bp | 1928063 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640469703 |
|---|
| Product | ABC-2 type transport system, membrane protein |
|---|
| Protein accession | YP_001154349 |
|---|
| Protein GI | 145592347 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.148287 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACGA TTAAAGACGC GCTGGTAATA GCGTGGATCA ACGGCTGGAT CGCCGCGACT
AGAGGCTGGG TGTGGGTAGT GGCGAGCTCC GTCAGCCCCG CGGCTTTTTT AGTCTTGCTC
GCCATCTACG GCGGCGTTGA GGGCTTGAAG TGGGGCCTAG TGGGCGGTTT TATTTGGACC
ATCGCCTCTA ACGGCATCTC GCTGATAGGA GACGCCACCT ACTACAGGCT AGGCATAAAG
TACCAGAGCA TGCTCACAGC GGCGCCCGTC TCCCCCGCCG GCTACGCCCT CGGCCTCGCC
CTAAGCTCGT TTATCTTCGC CCTGCCAACC CTGGCCGTGT ACCTCGTAGC CATGTACCTC
CTCGGCGTCC CCTTCCTCTC CCTAGAAACA GTATACGCCC TGACAGCTCT CTGGCTGGCG
TCTGCCGGCA TCGGCTTCAC GCTGTCGGGC TTCATAAAAC ACATGAGATA TGCATGGGCC
CTCCCCCAGA TATTGTCCGC TGTCTTCACC ATAGGGGCTC CTGTGTACTA CCCAGCAGAC
CTACTCCCCA GCCCCTACCT CGCCGTGTTG TTGCCCACTG GCGCCGCGGC CGTGGTGGTA
CAACACTTCA CGGGCCTACG CGCATATGAT TTGGAGCTAG TGGCCGTCGC GGCCCTGGCG
CTGGCGCTTC AGAGCTTAGT TGGGCTGTAC TTCTTGTTTA AGCTAGCTCG GTGGAGACAA
CCCTAA
|
|---|
| Protein sequence | MKTIKDALVI AWINGWIAAT RGWVWVVASS VSPAAFLVLL AIYGGVEGLK WGLVGGFIWT
IASNGISLIG DATYYRLGIK YQSMLTAAPV SPAGYALGLA LSSFIFALPT LAVYLVAMYL
LGVPFLSLET VYALTALWLA SAGIGFTLSG FIKHMRYAWA LPQILSAVFT IGAPVYYPAD
LLPSPYLAVL LPTGAAAVVV QHFTGLRAYD LELVAVAALA LALQSLVGLY FLFKLARWRQ
P
|
|---|
| |