Gene Pars_2143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_2143 
Symbol 
ID5054370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1919860 
End bp1920444 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content49% 
IMG OID640469695 
Producthypothetical protein 
Protein accessionYP_001154341 
Protein GI145592339 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTATGA GTGTGAAAAA AGACAGAGTT AATATCGCTG TATCTAGAGA TGTTGCAGAA 
AGACTTGCCA GAATTGCCGA GGGACAAGGC ATGACGCAGT ATGCCCTCGC TAACCAGATA
CTCTCTCTTG GACTCGATCT CATTGAACAA GGCTACACGC TCCAGCAGAT TAGGGAAGTG
GCGCTGTTTT TCCGCGTAAT GATAGAGCTG GAGTCTGTAC CTATCCCAGG GAGGTTGCTG
GACAAATTAA TAGCGGATAT GTACAAGGCA AATCCCGAAG TGGTGCATAG GGCATGGTGC
GAGGCGGGCA AGATGCTGGC AAGCTATGTT AAGGCAGTAT TCGGCTCCAT CGAGGCTGCG
GCGTCGCTTG TTCCCTACAT ATCTAAAATA GTCCCTGCGA AGCGGTTTGA GGTGAAAACA
GACAGCAAGG AGTTCGTCAT GGAGACGCTC GGCGTAGGAT ACAGTACTGA GAGCGTTGAG
GCTACGGCTA AGGCTGTACA TTGCTTTCTA GATGAGCTGG GATACGAGGT TAAGGAGTCT
ATTACAGCAC CTGGCATACT GAAAGTCAAG GCGCTTAAAA AATAG
 
Protein sequence
MCMSVKKDRV NIAVSRDVAE RLARIAEGQG MTQYALANQI LSLGLDLIEQ GYTLQQIREV 
ALFFRVMIEL ESVPIPGRLL DKLIADMYKA NPEVVHRAWC EAGKMLASYV KAVFGSIEAA
ASLVPYISKI VPAKRFEVKT DSKEFVMETL GVGYSTESVE ATAKAVHCFL DELGYEVKES
ITAPGILKVK ALKK