Gene Pars_2142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_2142 
Symbol 
ID5055539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1918942 
End bp1919859 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content55% 
IMG OID640469694 
ProductABC transporter related 
Protein accessionYP_001154340 
Protein GI145592338 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATAG AGCTGAGGGG AGTCTGGAAA AAACAGAGTA GTTTTATCCT CGGCCCTGTT 
GACCTGGCAA TAAGGAAAGG CGAGAGAATC GCCGTAGTGG GGCCCTCAGG ATCGGGTAAG
TCAACGCTTT TGCGTATCGT CGCCGGCCTC ATGACCCCCG ACCGCGGGCG CGTGTATATA
GACGGGAGAG ATGTAACATA CGAAGAGCCC TGGAAACGGG GCGTAGCGGT GGTATTCCAA
AGCCCAGCCC TCTTTCCATC ACTTACCGTC TTGGAAAACA TAGTAGAGCC CCTCCTCTCC
AAGGGCGTTG CCAAAAGCGA GGCAGTTCAA CGGGCGCGGG AAGTCCTACA GCGGCTTGGA
ATTTTGCACC TATCGGCCAG ATACCCCGCC CAGCTCAGCA GAGGCCAGCA ACAGAGAGTT
TCGCTGGCAA GAGCCTTGAT CTTAGATCCA CCTGTTTTGC TATTTGACGA GCCGCTCACA
GCGCTTGACC CACCGCTGAG AGGCGAGGTT TTGCCTTACA TTTACGAGGC GTCGCGGGGC
AGAACTGTAG TCTACGTCAC ACACGATTTT GAAGAAGCTA CATTCACAGC GGATAGGTTG
GTTGTGCTTA TGGAGGGCAA AGTCGCAGCC GAGGGGAGGG CCGCGGAGGT GTTTGAAAAC
CCGCCGACAC CACAAGTGGC CCAGTTTCTG GGCTATGTGA ATAGGCTAGG CGCCACTTGC
GGTAGCTTGT ACTTCAGGCC GTGGGACGTC AAGCCGGGAT CTTCGTATAG GGGAAAAATC
CTGGCTATCT GGTACAAAGC CGGCAAATAC GAAGTGCTGG CTGAGGTAGG AGACTCCCAT
GTGAGACTTC TTTGGCACGA AATGCCAAAA AGCGGGTTTA TTGAGTTCGA CGTGACTAGG
GGAATGTGCT TCCACTAG
 
Protein sequence
MSIELRGVWK KQSSFILGPV DLAIRKGERI AVVGPSGSGK STLLRIVAGL MTPDRGRVYI 
DGRDVTYEEP WKRGVAVVFQ SPALFPSLTV LENIVEPLLS KGVAKSEAVQ RAREVLQRLG
ILHLSARYPA QLSRGQQQRV SLARALILDP PVLLFDEPLT ALDPPLRGEV LPYIYEASRG
RTVVYVTHDF EEATFTADRL VVLMEGKVAA EGRAAEVFEN PPTPQVAQFL GYVNRLGATC
GSLYFRPWDV KPGSSYRGKI LAIWYKAGKY EVLAEVGDSH VRLLWHEMPK SGFIEFDVTR
GMCFH