Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_2139 |
Symbol | |
ID | 5056055 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | + |
Start bp | 1913983 |
End bp | 1916205 |
Gene Length | 2223 bp |
Protein Length | 740 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640469691 |
Product | elongation factor EF-2 |
Protein accession | YP_001154337 |
Protein GI | 145592335 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0480] Translation elongation factors (GTPases) |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00484] translation elongation factor EF-G [TIGR00490] translation elongation factor aEF-2 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGTCTG CAGTCAGGAT TGTGGAGAAG CAACTGGATG AAATTCTGGC CATTGCTAGG AACCCGGCGC AGATACGAAA CGCCGGCACT CTGGCGCATG TGGACCACGG CAAGACCACC ACCACGGACT CGCTCCTCAT GGGCGCGGGG TTGCTCTCGC CGAAGGTGGC AGGGAAGGCG CTGGCCATGG ACTTCGTCGC TATTGAGCAG CTCCGCCAGA TGACCGTGAA GGCCGCCAAC ATATCGCTCT ACTTCGAGTA CGGTGGGAAG CCCTACTTGG TGAACTTCGT CGACACGCCG GGACACGTCG ACTTCACAGG CCACGTCACG CGCTCGCTTA GAGTTATGGA CGGCGGCCTC GTCGTTGTAG ACAGCGTCGA GGGGGTCATG ACGCAGACGG AGACGGTGGT CAGGCAGGCG CTTGAGGAGT ACGTCCGCCC AGTCCTATTC ATTAATAAGA TCGATAGGCT GATAAAAGAG CTGAGGCTAT CGCCGCAGGA GATACAGCAG AGGATCCTCA CAATAGTCAA GGACTTCAAC GCTCTCATTG ATATGTTCGC CCCGCCGGAG TTTAAGGATA AATGGAAGGT CGATCCCGCC AAGGGGCAGG TAGCTCTAGG CTCTGCGTTA CATAAGTGGG GCATAACCAT ACCCATGGCC CAGAAGGCCG GTTTGAAGTT TAGCAACATA GTAGATGCCT ACGAGAAAGG GTATGTGGAC AAGCTAGGGG AGGAGTTCCC CCTGTACAAG ACCCTCCTCA CCATGATCAT AGAGCACGTC CCGCCGCCGA ACGTTGCCCA GAAGTACAGA ATCCCGAGGC TTTGGCGTGG CGACTTAAAC AGCGAGGTGG GCAAGGCGAT GCTGGAAGCC GACCCCAACG GCCCGACGGT GATAGCAGTA TCCAAGGTAA ACAAGGATCC CCACGCCGGT TTGATCGCCA CAGGGCGTGT CTTCTCGGGG ACTATCAGGG AAGGCGACGA GGTCTACATC ATCGGGAGAA AGATGAAGAA GAAAGTCCTC CAGACGTACA TCTACATGGG ACCCACGAGG ATAATCGTGC CTTACATGCC CGCCGGCAAC ATAGTGGCGC TGATGGGCGT AGACGAGGCA AGGGCAGGAG ACACGCTGGT GGACCCAAGG CTGACCGAGG TACCGCCTTT CGAGAAGATG AGGTACATTG CGGAGCCCGT GGTGACGGTC GCAATTGAGC CGAAGAACCC GGCGGAGCTG GCAAAGCTGG TGGAGGCCTT AAAGGATTTG GTGATTGAGG ACCCAACTCT CGACTTGAAG ATTGACCAGG AGACTGGGCA GATCCTCCTC TCAGGCGTCG GCACGCTCCA CTTGGAGATC GCAACGTGGT TGCTTAAGGA GAGGGCTAAG ACAGAGTTTA CGGTATCGCC GCCGTTGATA AGGTTTAGGG AGACTGTCAG GGAGAGGTCC CAGGTGTGGG AGGGCAAGTC GCCGAATAAG CACAACAAGC TTTACTTCTA CGTGGAGCCT CTCGACGAGA CTACGGTGGA GCTAATCGCC ACGAAGGAGA TTACAGAAGA GCAGGACCCG AGGGAGAGGG CCAAGATTCT GAGGGAGAAG GCGGGCTGGG ACACCGACGA GGCTAGGGGC ATCTGGGCGA TCGACGACCG CTACTTCAAC GTCATTGTGG ACAAGACGAC AGGTATCCAG TACCTCCGCG AGATTAGGGA CTACATTGTC CAGGGCTTCC GCTGGGCAAT GGAGGCTGGG CCGCTGGCCC AGGAGCCTAT GAGAGGGGTT AAGGTAGTTC TCGTCGATGC CGTCGTCCAC GAGGACCCTG CCCACCGCGG ACCTGCGCAG ATAATGCCTG CAACTAAAAA CGCCATCTTC GCCGCCGTGC TTTCAGCGAG GCCGACACTT CTTGAGCCAT TAGTGAGGCT AGACATAAAG GTGGCCCCTG ACTACATCGG ATCTGTTACC TCCGTGCTGA ATAAGCATAG GGGCAAGATC CTCGACATGA CTCAGCAGGA GTACATGGCC TACCTTAGGG CTGAGTTGCC GGTGCTTGAG TCTTTCACAA TCAGCGATGA GCTCCGCGCC GCCGCAGCTG GCAAGATCTT CTGGTCTATG CAGTTCGCGA GGTGGGCTCC TTACCCAGAG TCTATGCTTG TCGACTTCGT GAAGCAGTTG AGGAAGAAGA AGGGGCTGAA GGAGGATATA CCAAAGCCTA CAGACTTCGT CGAGGTCTTT TAA
|
Protein sequence | MSSAVRIVEK QLDEILAIAR NPAQIRNAGT LAHVDHGKTT TTDSLLMGAG LLSPKVAGKA LAMDFVAIEQ LRQMTVKAAN ISLYFEYGGK PYLVNFVDTP GHVDFTGHVT RSLRVMDGGL VVVDSVEGVM TQTETVVRQA LEEYVRPVLF INKIDRLIKE LRLSPQEIQQ RILTIVKDFN ALIDMFAPPE FKDKWKVDPA KGQVALGSAL HKWGITIPMA QKAGLKFSNI VDAYEKGYVD KLGEEFPLYK TLLTMIIEHV PPPNVAQKYR IPRLWRGDLN SEVGKAMLEA DPNGPTVIAV SKVNKDPHAG LIATGRVFSG TIREGDEVYI IGRKMKKKVL QTYIYMGPTR IIVPYMPAGN IVALMGVDEA RAGDTLVDPR LTEVPPFEKM RYIAEPVVTV AIEPKNPAEL AKLVEALKDL VIEDPTLDLK IDQETGQILL SGVGTLHLEI ATWLLKERAK TEFTVSPPLI RFRETVRERS QVWEGKSPNK HNKLYFYVEP LDETTVELIA TKEITEEQDP RERAKILREK AGWDTDEARG IWAIDDRYFN VIVDKTTGIQ YLREIRDYIV QGFRWAMEAG PLAQEPMRGV KVVLVDAVVH EDPAHRGPAQ IMPATKNAIF AAVLSARPTL LEPLVRLDIK VAPDYIGSVT SVLNKHRGKI LDMTQQEYMA YLRAELPVLE SFTISDELRA AAAGKIFWSM QFARWAPYPE SMLVDFVKQL RKKKGLKEDI PKPTDFVEVF
|
| |